Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AC134669.1-201ENST00000581275 672 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AL353778.1-201ENST00000603149 408 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 OR7M1P-201ENST00000608946 533 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 AL021918.2-201ENST00000613415 194 ntBASIC5.86□□□□□ -1.47
VRK3Q8IV63 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VRK3Q8IV63 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
VRK3Q8IV63 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 RBPJP7-201ENST00000442803 1447 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 RBPJP5-201ENST00000449433 1447 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC017079.1-201ENST00000333650 415 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AP002784.2-201ENST00000397300 549 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 FABP12P1-201ENST00000401911 322 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 OR2W4P-201ENST00000406496 926 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 RPL23AP18-201ENST00000416139 468 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC069154.1-201ENST00000432914 542 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 UBE2D3P1-201ENST00000436669 444 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 RPS12P17-201ENST00000438591 377 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 MTND2P20-201ENST00000440805 661 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 RPS7P3-201ENST00000443360 580 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 CUBNP2-201ENST00000443534 1139 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC005077.1-201ENST00000449226 375 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC073387.1-201ENST00000453261 709 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 RPS17P11-201ENST00000474297 293 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC008629.2-201ENST00000503783 483 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 PRMT5P1-201ENST00000514351 598 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 RN7SKP288-201ENST00000516227 268 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC010306.1-201ENST00000523223 1117 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AP001804.1-201ENST00000526868 919 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC023050.2-201ENST00000544968 387 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC090826.1-203ENST00000569235 490 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC012213.3-201ENST00000577199 777 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 SNX6P1-201ENST00000601728 1224 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC121247.2-201ENST00000604776 136 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AL353600.1-201ENST00000608148 251 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC108673.3-201ENST00000609183 335 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC093673.2-201ENST00000609674 331 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 AP002782.1-201ENST00000623107 614 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 ZNF101P1-201ENST00000435701 1720 ntBASIC5.85□□□□□ -1.47
VRK3Q8IV63 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VRK3Q8IV63 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.85□□□□□ -1.47
VRK3Q8IV63 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms