Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 DDX10P2-201ENST00000417796 2614 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC018992.1-201ENST00000523778 2149 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC005522.1-201ENST00000395416 346 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AF228730.4-201ENST00000421457 183 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 Z93242.1-201ENST00000427102 353 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AL022238.1-201ENST00000442557 355 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC099670.1-201ENST00000455141 783 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 SNRPFP4-201ENST00000456366 242 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC018638.3-201ENST00000461273 132 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AP003385.3-201ENST00000472498 287 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC104687.1-201ENST00000485829 412 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 NIPA2P2-201ENST00000496376 1083 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 RN7SL143P-201ENST00000496780 297 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC091951.2-201ENST00000500762 203 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 RNU6-1153P-201ENST00000516760 105 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 RN7SKP2-201ENST00000517003 319 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC084337.1-201ENST00000524809 686 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 RPS27AP19-201ENST00000597285 458 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC018690.1-201ENST00000608144 626 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC011472.4-201ENST00000615848 491 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 RN7SL680P-201ENST00000620379 299 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 AC019278.1-201ENST00000623516 479 ntBASIC7.72□□□□□ -1.17
RNF135Q8IUD6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
RNF135Q8IUD6 OR2A3P-202ENST00000641249 1776 ntBASIC7.71□□□□□ -1.17
RNF135Q8IUD6 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
RNF135Q8IUD6 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AL162171.3-201ENST00000617439 3178 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 FUNDC2P3-201ENST00000334716 533 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 RNU5F-6P-201ENST00000362979 116 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 Y_RNA.535-201ENST00000384612 99 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 RNU6-1009P-201ENST00000390996 107 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 RNU6-1300P-201ENST00000391046 108 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 RNU6-248P-201ENST00000410720 107 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 RPL7AP51-201ENST00000422016 760 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AL034379.1-201ENST00000423216 253 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AC007742.1-201ENST00000425789 329 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AL389925.1-201ENST00000432257 728 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 ELOCP26-201ENST00000436067 329 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 PPIAP17-201ENST00000438507 471 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AL450263.2-201ENST00000439400 589 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.71□□□□□ -1.18
RNF135Q8IUD6 DPPA3P1-201ENST00000448050 469 ntBASIC7.71□□□□□ -1.18
RNF135Q8IUD6 AC104306.1-201ENST00000449702 371 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms