Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC100784.1-201ENST00000522790 310 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AL390334.1-201ENST00000556395 450 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC096996.1-201ENST00000563813 325 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC090607.5-201ENST00000615692 224 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AC000374.1-201ENST00000434698 1745 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRC28Q86X40 AL731532.2-201ENST00000623542 1953 ntBASIC4.82□□□□□ -1.64
LRRC28Q86X40 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRRC28Q86X40 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 MUC2-202ENST00000613187 4845 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AL353796.1-201ENST00000561542 3241 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AL159987.1-201ENST00000347911 293 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 BMS1P17-202ENST00000416720 316 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AL662874.1-201ENST00000426065 230 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 GAPDHP48-201ENST00000436626 961 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 Z84478.1-201ENST00000438230 1219 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC005297.1-201ENST00000444765 862 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 RPS23P6-201ENST00000466136 431 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 RPL32P33-201ENST00000487023 394 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 RN7SL101P-201ENST00000496350 279 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC109481.1-201ENST00000509173 282 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 DPPA2P4-201ENST00000563717 878 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 MIR4311-201ENST00000580794 100 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 MIR4505-201ENST00000582238 73 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC063977.5-201ENST00000601044 974 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 RNA5SP440-201ENST00000612665 119 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AL731566.1-201ENST00000620490 1937 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 SAMMSON-213ENST00000641336 1521 ntBASIC4.81□□□□□ -1.64
LRRC28Q86X40 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRC28Q86X40 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRC28Q86X40 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC104333.2-201ENST00000422630 192 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 CHEK2P5-201ENST00000423877 246 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC113412.1-201ENST00000425840 504 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.8□□□□□ -1.64
LRRC28Q86X40 AL157385.1-201ENST00000446973 268 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 PPIAP20-201ENST00000449839 135 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 AC023141.9-201ENST00000458734 412 ntBASIC4.8□□□□□ -1.64
LRRC28Q86X40 RN7SL174P-201ENST00000475578 289 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms