Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RPL12P17-201ENST00000432393 498 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.99□□□□□ -1.61
RFX4Q33E94 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RFX4Q33E94 AC019084.1-201ENST00000457337 432 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.99□□□□□ -1.61
RFX4Q33E94 AP002884.1-201ENST00000479691 655 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.99□□□□□ -1.61
RFX4Q33E94 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 HMGB1P42-201ENST00000532126 553 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 DPPA2P4-201ENST00000563717 878 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.99□□□□□ -1.61
RFX4Q33E94 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.99□□□□□ -1.61
RFX4Q33E94 AC025574.2-201ENST00000615621 514 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 RN7SL544P-201ENST00000617232 284 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AP005431.1-201ENST00000618479 319 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 RN7SL763P-201ENST00000620922 284 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AC073593.1-201ENST00000624500 411 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AL390318.1-201ENST00000624564 687 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AP003400.3-201ENST00000624904 346 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AC099654.6-201ENST00000636487 512 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RFX4Q33E94 AC132825.8-201ENST00000640783 297 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 CDC27P2-201ENST00000425026 1922 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RFX4Q33E94 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RFX4Q33E94 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 LINC01963-201ENST00000562038 3148 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.98□□□□□ -1.61
RFX4Q33E94 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 IFIT1P1-201ENST00000400497 1449 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 STX3-208ENST00000641815 3236 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RFX4Q33E94 DBIP1-201ENST00000401435 260 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX4Q33E94 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX4Q33E94 KCTD9P1-201ENST00000430462 1167 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 AL512637.1-201ENST00000439523 1231 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 DNAJB5P1-201ENST00000454004 806 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 ACA64.1-201ENST00000459171 127 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 AC109464.1-201ENST00000511091 819 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 MRPS16P1-201ENST00000523462 412 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.98□□□□□ -1.61
RFX4Q33E94 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX4Q33E94 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.98□□□□□ -1.61
RFX4Q33E94 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX4Q33E94 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.98□□□□□ -1.61
RFX4Q33E94 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.98□□□□□ -1.61
RFX4Q33E94 AC011840.5-201ENST00000582125 771 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 AP005262.1-201ENST00000582646 997 ntBASIC4.98□□□□□ -1.61
RFX4Q33E94 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX4Q33E94 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.98□□□□□ -1.61
RFX4Q33E94 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
RFX4Q33E94 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX4Q33E94 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 AL022393.1-201ENST00000625142 1677 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.97□□□□□ -1.61
RFX4Q33E94 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 RNA5SP131-201ENST00000365452 119 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 RN7SKP187-201ENST00000365536 330 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 AL359643.1-201ENST00000404109 423 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 RMRPP5-201ENST00000411156 267 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX4Q33E94 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AC110602.1-201ENST00000437414 318 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.97□□□□□ -1.61
RFX4Q33E94 AL359839.1-201ENST00000451975 1160 ntBASIC4.97□□□□□ -1.61
RFX4Q33E94 OR11I1P-201ENST00000486033 954 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms