Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC091982.1-202ENST00000473923 343 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 RPL9P6-201ENST00000492764 598 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 OR5H5P-201ENST00000503164 928 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 AC095057.1-201ENST00000507583 168 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC096754.1-201ENST00000508904 818 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 OR51A1P-201ENST00000511110 946 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH1Q08174 IGHV3-32-201ENST00000519182 355 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 OR5M6P-201ENST00000530227 937 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AC068305.2-201ENST00000550567 1205 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 SYPL1P2-201ENST00000582878 727 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 COX6CP16-201ENST00000603667 216 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AP000860.1-201ENST00000605250 559 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AL158211.4-201ENST00000606988 584 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AC006338.1-201ENST00000618453 749 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 DUXAP9-208ENST00000622815 614 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
PCDH1Q08174 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH1Q08174 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 SPATA31C2-201ENST00000324915 3777 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 AP002833.3-201ENST00000625075 2265 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 DCAF13P3-201ENST00000561147 1334 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDH1Q08174 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
PCDH1Q08174 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
PCDH1Q08174 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDH1Q08174 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
PCDH1Q08174 TMSB4XP2-201ENST00000335179 210 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 Y_RNA.61-201ENST00000362835 102 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 RN7SKP226-201ENST00000364912 300 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 RNU6-452P-201ENST00000384406 107 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 RNU6-1011P-201ENST00000384668 107 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDH1Q08174 RNU6-244P-201ENST00000391028 104 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 RNA5SP105-201ENST00000391123 113 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC092745.2-202ENST00000411880 369 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 RPL31P54-201ENST00000429803 370 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 VDAC2P3-201ENST00000430995 828 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 ANXA2P2-201ENST00000435128 1020 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC004865.1-201ENST00000442276 1003 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AL512593.1-201ENST00000444758 779 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC092001.1-201ENST00000453012 261 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC098824.1-201ENST00000453565 980 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC019080.2-201ENST00000453859 394 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC135721.2-201ENST00000464237 300 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC073522.1-201ENST00000483312 377 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 SCARNA6-201ENST00000515982 265 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 EEF1B2P2-201ENST00000519625 676 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDH1Q08174 AC104383.1-201ENST00000530297 370 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 NDUFA3P2-201ENST00000531434 232 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 AP002453.2-201ENST00000533503 320 ntBASIC6.81□□□□□ -1.32
PCDH1Q08174 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms