Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 U91328.4-201ENST00000608919 517 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.86□□□□□ -1.79
CKS1BP61024 SNX18P1Y-201ENST00000616231 511 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 AC067852.7-201ENST00000623270 535 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC3.86□□□□□ -1.79
CKS1BP61024 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC3.86□□□□□ -1.79
CKS1BP61024 LINC01613-201ENST00000561476 2780 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC3.86□□□□□ -1.79
CKS1BP61024 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 AC100778.3-201ENST00000580060 1750 ntBASIC3.86□□□□□ -1.79
CKS1BP61024 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
CKS1BP61024 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CKS1BP61024 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
CKS1BP61024 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CKS1BP61024 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 AC018717.1-201ENST00000457712 1505 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CKS1BP61024 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CKS1BP61024 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CKS1BP61024 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CKS1BP61024 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CKS1BP61024 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.85□□□□□ -1.79
CKS1BP61024 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CKS1BP61024 GCNT6-201ENST00000379591 934 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 U3.28-201ENST00000391249 210 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 ARSFP1-201ENST00000398758 477 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC3.85□□□□□ -1.79
CKS1BP61024 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 RPL7AP51-201ENST00000422016 760 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 VN1R20P-201ENST00000425215 966 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL353597.2-202ENST00000434901 373 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC3.85□□□□□ -1.79
CKS1BP61024 AL590004.3-202ENST00000445883 451 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AC099063.2-201ENST00000446360 662 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL445466.1-201ENST00000448432 357 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 RPS23P9-201ENST00000448848 438 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 NDUFS5P3-201ENST00000450668 321 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL121877.1-201ENST00000453704 622 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC099670.1-201ENST00000455141 783 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AC063955.1-201ENST00000462872 685 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC021146.10-201ENST00000515628 706 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC3.85□□□□□ -1.79
CKS1BP61024 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.85□□□□□ -1.79
CKS1BP61024 MIR4260-201ENST00000583107 67 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AC090774.2-201ENST00000584708 322 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC3.85□□□□□ -1.79
CKS1BP61024 ELOCP28-201ENST00000590044 317 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC073333.2-201ENST00000603589 769 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AC004948.1-201ENST00000609858 672 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL159169.2-201ENST00000610061 1269 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC3.85□□□□□ -1.79
CKS1BP61024 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL512652.1-201ENST00000619006 500 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AC025262.3-201ENST00000623666 360 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 AL357562.1-201ENST00000624911 609 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC010325.3-201ENST00000641084 394 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CKS1BP61024 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CKS1BP61024 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.85□□□□□ -1.79
CKS1BP61024 AC007996.1-201ENST00000620414 2821 ntBASIC3.85□□□□□ -1.79
CKS1BP61024 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC3.84□□□□□ -1.79
CKS1BP61024 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CKS1BP61024 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.84□□□□□ -1.79
CKS1BP61024 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC3.84□□□□□ -1.79
CKS1BP61024 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC3.84□□□□□ -1.79
CKS1BP61024 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CKS1BP61024 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.84□□□□□ -1.79
CKS1BP61024 AC011155.1-201ENST00000316512 456 ntBASIC3.84□□□□□ -1.79
CKS1BP61024 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CKS1BP61024 RNA5SP132-201ENST00000364725 118 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms