Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.58□□□□□ -1.68
AP3S2P59780 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.58□□□□□ -1.68
AP3S2P59780 RN7SL356P-201ENST00000582228 248 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.58□□□□□ -1.68
AP3S2P59780 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.58□□□□□ -1.68
AP3S2P59780 AC090236.2-201ENST00000587933 1101 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.58□□□□□ -1.68
AP3S2P59780 AL159169.2-201ENST00000610061 1269 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 AL136228.1-201ENST00000622221 319 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.58□□□□□ -1.68
AP3S2P59780 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.58□□□□□ -1.68
AP3S2P59780 AC107021.2-201ENST00000567714 2095 ntBASIC4.58□□□□□ -1.68
AP3S2P59780 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP3S2P59780 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 LINC01963-201ENST00000562038 3148 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
AP3S2P59780 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 IFIT1P1-201ENST00000400497 1449 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.57□□□□□ -1.68
AP3S2P59780 HSPA8P18-201ENST00000439846 1928 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 HMGB3P7-201ENST00000400214 611 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 DBIP1-201ENST00000401435 260 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 AC013429.2-201ENST00000418798 781 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 VN1R20P-201ENST00000425215 966 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.57□□□□□ -1.68
AP3S2P59780 HMGB3P9-201ENST00000441799 583 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 BTF3P6-201ENST00000448054 499 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 GYG1P1-201ENST00000460864 698 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 RN7SL393P-201ENST00000463588 296 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
AP3S2P59780 RN7SL267P-201ENST00000485107 261 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 RN7SL814P-201ENST00000487715 300 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AC009120.1-201ENST00000493458 473 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 RN7SL447P-201ENST00000494711 245 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.57□□□□□ -1.68
AP3S2P59780 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.57□□□□□ -1.68
AP3S2P59780 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.57□□□□□ -1.68
AP3S2P59780 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.57□□□□□ -1.68
AP3S2P59780 AP003396.4-201ENST00000527574 265 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 HMGN2P36-201ENST00000529541 409 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.57□□□□□ -1.68
AP3S2P59780 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC4.57□□□□□ -1.68
AP3S2P59780 HSPE1P2-201ENST00000554777 306 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AC092332.1-201ENST00000563684 829 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 MIR4258-201ENST00000580920 91 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 MIR212-201ENST00000586026 110 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.57□□□□□ -1.68
AP3S2P59780 FAM27E4-201ENST00000605259 342 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 AC097505.1-201ENST00000610199 565 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 MIR8069-1-201ENST00000616627 86 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 AC245014.3-201ENST00000618589 347 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 MIR8069-2-201ENST00000621412 86 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 AC126323.6-202ENST00000568092 3511 ntBASIC4.57□□□□□ -1.68
AP3S2P59780 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.57□□□□□ -1.68
AP3S2P59780 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP3S2P59780 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.56□□□□□ -1.68
AP3S2P59780 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.56□□□□□ -1.68
AP3S2P59780 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.56□□□□□ -1.68
AP3S2P59780 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP3S2P59780 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.56□□□□□ -1.68
AP3S2P59780 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP3S2P59780 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
AP3S2P59780 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
AP3S2P59780 AC063976.2-201ENST00000425667 3556 ntBASIC4.56□□□□□ -1.68
AP3S2P59780 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP3S2P59780 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP3S2P59780 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
AP3S2P59780 AC005294.1-201ENST00000355509 281 ntBASIC4.56□□□□□ -1.68
AP3S2P59780 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.56□□□□□ -1.68
AP3S2P59780 MIR551A-201ENST00000385042 96 ntBASIC4.56□□□□□ -1.68
AP3S2P59780 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms