Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN20P56880 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN20P56880 AK4P4-201ENST00000419465 646 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 GLUD1P9-201ENST00000420997 1173 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AL121882.1-201ENST00000422893 417 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN20P56880 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 AL138787.1-202ENST00000437804 898 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN20P56880 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN20P56880 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN20P56880 AL157884.3-201ENST00000448273 1184 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AC004129.2-201ENST00000457229 287 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN20P56880 OR9N1P-202ENST00000494289 481 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC016550.1-201ENST00000505348 785 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC093770.1-201ENST00000511559 571 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC090424.1-201ENST00000535243 736 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AC009852.2-201ENST00000567898 485 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC005776.1-201ENST00000603164 290 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AC120053.1-201ENST00000607706 736 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AC025016.1-201ENST00000616746 682 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 RMST_5.1-201ENST00000618704 126 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 AL133370.2-201ENST00000619934 439 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN20P56880 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN20P56880 AC083899.2-201ENST00000423285 1376 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 AC239868.2-201ENST00000564237 4527 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLDN20P56880 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN20P56880 OR9K1P-202ENST00000641111 3217 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN20P56880 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.23□□□□□ -1.57
CLDN20P56880 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN20P56880 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CLDN20P56880 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN20P56880 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN20P56880 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN20P56880 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLDN20P56880 SNORD65-201ENST00000391079 73 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 RPS3AP2-201ENST00000407190 754 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AL357752.1-201ENST00000412817 349 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.22□□□□□ -1.57
CLDN20P56880 MTND2P9-201ENST00000422293 931 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC127526.2-201ENST00000426436 775 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC104843.2-201ENST00000427666 297 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 BX119321.1-201ENST00000428912 797 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC007563.3-201ENST00000433233 371 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AL513321.1-201ENST00000441175 761 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC015983.1-201ENST00000441577 373 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC006326.1-201ENST00000445465 787 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 RPL36AP39-201ENST00000445859 318 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 RPS23P9-201ENST00000448848 438 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 RPL31P15-201ENST00000449770 338 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 AC016724.1-201ENST00000453215 421 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN20P56880 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN20P56880 OR7E157P-201ENST00000494376 911 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN20P56880 NENFP3-201ENST00000503735 313 ntBASIC5.22□□□□□ -1.57
CLDN20P56880 AC093763.2-201ENST00000505334 1223 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms