Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MT-RNR2-201ENST00000387347 1559 ntBASIC5.42□□□□□ -1.54
CDH13P55290 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH13P55290 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CDH13P55290 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CDH13P55290 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.42□□□□□ -1.54
CDH13P55290 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH13P55290 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CDH13P55290 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH13P55290 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CDH13P55290 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 RPL10P10-201ENST00000403509 664 ntBASIC5.41□□□□□ -1.54
CDH13P55290 RMRPP5-201ENST00000411156 267 ntBASIC5.41□□□□□ -1.54
CDH13P55290 AC079809.1-201ENST00000415468 276 ntBASIC5.41□□□□□ -1.54
CDH13P55290 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH13P55290 AC066692.1-201ENST00000421721 457 ntBASIC5.41□□□□□ -1.54
CDH13P55290 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH13P55290 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 AL022331.1-201ENST00000429025 477 ntBASIC5.41□□□□□ -1.54
CDH13P55290 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH13P55290 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH13P55290 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 PSAT1P4-201ENST00000466500 526 ntBASIC5.41□□□□□ -1.54
CDH13P55290 RN7SL583P-201ENST00000475692 287 ntBASIC5.41□□□□□ -1.54
CDH13P55290 AP002884.1-201ENST00000479691 655 ntBASIC5.41□□□□□ -1.54
CDH13P55290 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH13P55290 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH13P55290 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH13P55290 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 UGT2A3P7-201ENST00000510485 734 ntBASIC5.41□□□□□ -1.54
CDH13P55290 ACTR6P1-201ENST00000514311 1104 ntBASIC5.41□□□□□ -1.54
CDH13P55290 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.41□□□□□ -1.54
CDH13P55290 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.41□□□□□ -1.54
CDH13P55290 MRPS16P1-201ENST00000523462 412 ntBASIC5.41□□□□□ -1.54
CDH13P55290 HMGB1P42-201ENST00000532126 553 ntBASIC5.41□□□□□ -1.54
CDH13P55290 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.41□□□□□ -1.54
CDH13P55290 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 AC092121.1-201ENST00000569452 202 ntBASIC5.41□□□□□ -1.54
CDH13P55290 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 SNORD39.2-201ENST00000579995 76 ntBASIC5.41□□□□□ -1.54
CDH13P55290 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.41□□□□□ -1.54
CDH13P55290 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.41□□□□□ -1.54
CDH13P55290 MIR6780B-201ENST00000610307 79 ntBASIC5.41□□□□□ -1.54
CDH13P55290 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CDH13P55290 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.41□□□□□ -1.54
CDH13P55290 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 AC026523.2-201ENST00000625039 7739 ntBASIC5.41□□□□□ -1.54
CDH13P55290 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CDH13P55290 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH13P55290 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
CDH13P55290 AC083899.1-201ENST00000454465 3819 ntBASIC5.4□□□□□ -1.54
CDH13P55290 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH13P55290 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
CDH13P55290 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 AC003973.3-201ENST00000624863 2822 ntBASIC5.4□□□□□ -1.54
CDH13P55290 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 SRRM1P3-201ENST00000426911 2678 ntBASIC5.4□□□□□ -1.54
CDH13P55290 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH13P55290 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.4□□□□□ -1.54
CDH13P55290 AC245060.4-201ENST00000413293 1121 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AC007161.1-204ENST00000423039 460 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AC127526.2-201ENST00000426436 775 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH13P55290 FAR1P1-201ENST00000427163 934 ntBASIC5.4□□□□□ -1.54
CDH13P55290 HMGN2P27-201ENST00000427352 270 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH13P55290 HLA-DPA3-207ENST00000454398 229 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AC087672.1-201ENST00000479876 766 ntBASIC5.4□□□□□ -1.54
CDH13P55290 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.4□□□□□ -1.54
CDH13P55290 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 AC021106.1-201ENST00000509020 1058 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH13P55290 AC006499.4-201ENST00000510947 694 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AC091912.1-201ENST00000511351 248 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AC067904.2-201ENST00000517322 1283 ntBASIC5.4□□□□□ -1.54
CDH13P55290 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH13P55290 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CDH13P55290 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.4□□□□□ -1.54
CDH13P55290 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH13P55290 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 AP002884.5-201ENST00000595053 1132 ntBASIC5.4□□□□□ -1.54
CDH13P55290 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CDH13P55290 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH13P55290 AL356608.1-201ENST00000610034 820 ntBASIC5.4□□□□□ -1.54
CDH13P55290 RN7SL544P-201ENST00000617232 284 ntBASIC5.4□□□□□ -1.54
CDH13P55290 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.4□□□□□ -1.54
CDH13P55290 RN7SL763P-201ENST00000620922 284 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms