Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.3□□□□□ -1.24
USP11P51784 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 AL157884.1-201ENST00000424561 454 ntBASIC7.3□□□□□ -1.24
USP11P51784 OR2B8P-201ENST00000432841 938 ntBASIC7.3□□□□□ -1.24
USP11P51784 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC7.3□□□□□ -1.24
USP11P51784 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 HMGB3P6-201ENST00000444896 598 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.3□□□□□ -1.24
USP11P51784 OR52E7P-201ENST00000452394 933 ntBASIC7.3□□□□□ -1.24
USP11P51784 RN7SL39P-201ENST00000462264 297 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC084754.1-201ENST00000463466 464 ntBASIC7.3□□□□□ -1.24
USP11P51784 RPL9P33-201ENST00000484311 566 ntBASIC7.3□□□□□ -1.24
USP11P51784 LINC00888-204ENST00000487386 421 ntBASIC7.3□□□□□ -1.24
USP11P51784 OR5H4P-201ENST00000510851 923 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC093816.1-201ENST00000515076 913 ntBASIC7.3□□□□□ -1.24
USP11P51784 Y_RNA.695-201ENST00000516715 107 ntBASIC7.3□□□□□ -1.24
USP11P51784 IGKV1D-22-201ENST00000518953 324 ntBASIC7.3□□□□□ -1.24
USP11P51784 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.3□□□□□ -1.24
USP11P51784 AL121766.1-201ENST00000547436 487 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.3□□□□□ -1.24
USP11P51784 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC7.3□□□□□ -1.24
USP11P51784 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.3□□□□□ -1.24
USP11P51784 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.3□□□□□ -1.24
USP11P51784 MIR4789-201ENST00000577469 82 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC138207.8-204ENST00000579588 527 ntBASIC7.3□□□□□ -1.24
USP11P51784 RN7SL475P-201ENST00000583379 298 ntBASIC7.3□□□□□ -1.24
USP11P51784 RN7SL622P-201ENST00000585292 275 ntBASIC7.3□□□□□ -1.24
USP11P51784 AP001269.3-201ENST00000588718 329 ntBASIC7.3□□□□□ -1.24
USP11P51784 VN1R82P-201ENST00000601481 356 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC011500.1-201ENST00000601963 469 ntBASIC7.3□□□□□ -1.24
USP11P51784 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 AC079089.3-201ENST00000603094 673 ntBASIC7.3□□□□□ -1.24
USP11P51784 SNORA74.4-201ENST00000607595 199 ntBASIC7.3□□□□□ -1.24
USP11P51784 MIR6889-201ENST00000613185 59 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC012254.5-201ENST00000623573 478 ntBASIC7.3□□□□□ -1.24
USP11P51784 OR8G3P-202ENST00000641572 1255 ntBASIC7.3□□□□□ -1.24
USP11P51784 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.3□□□□□ -1.24
USP11P51784 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.3□□□□□ -1.24
USP11P51784 AL391261.1-201ENST00000555712 1479 ntBASIC7.3□□□□□ -1.24
USP11P51784 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.3□□□□□ -1.24
USP11P51784 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 AC105235.1-201ENST00000623208 1816 ntBASIC7.29□□□□□ -1.24
USP11P51784 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
USP11P51784 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.29□□□□□ -1.24
USP11P51784 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.29□□□□□ -1.24
USP11P51784 RNA5SP333-201ENST00000363466 118 ntBASIC7.29□□□□□ -1.24
USP11P51784 RNU6-236P-201ENST00000363886 106 ntBASIC7.29□□□□□ -1.24
USP11P51784 RNA5SP334-201ENST00000364825 118 ntBASIC7.29□□□□□ -1.24
USP11P51784 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 SNORA11.5-201ENST00000408163 128 ntBASIC7.29□□□□□ -1.24
USP11P51784 AC092638.1-201ENST00000411966 1275 ntBASIC7.29□□□□□ -1.24
USP11P51784 NPM1P11-201ENST00000417106 855 ntBASIC7.29□□□□□ -1.24
USP11P51784 THEM7P-201ENST00000419556 672 ntBASIC7.29□□□□□ -1.24
USP11P51784 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 MTCO2P34-201ENST00000421994 607 ntBASIC7.29□□□□□ -1.24
USP11P51784 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.29□□□□□ -1.24
USP11P51784 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 AL160175.1-201ENST00000428124 247 ntBASIC7.29□□□□□ -1.24
USP11P51784 RHEBP2-201ENST00000450289 600 ntBASIC7.29□□□□□ -1.24
USP11P51784 MRPL42P4-201ENST00000453267 443 ntBASIC7.29□□□□□ -1.24
USP11P51784 CCNJP2-201ENST00000457810 1163 ntBASIC7.29□□□□□ -1.24
USP11P51784 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
USP11P51784 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.29□□□□□ -1.24
USP11P51784 RN7SL643P-201ENST00000471845 291 ntBASIC7.29□□□□□ -1.24
USP11P51784 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.29□□□□□ -1.24
USP11P51784 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.29□□□□□ -1.24
USP11P51784 GUSBP9-201ENST00000510138 584 ntBASIC7.29□□□□□ -1.24
USP11P51784 AC106800.3-201ENST00000511389 308 ntBASIC7.29□□□□□ -1.24
USP11P51784 NDUFA5P2-201ENST00000519723 344 ntBASIC7.29□□□□□ -1.24
USP11P51784 IGHV4-55-201ENST00000520889 368 ntBASIC7.29□□□□□ -1.24
USP11P51784 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.29□□□□□ -1.24
USP11P51784 CYCSP25-201ENST00000525280 316 ntBASIC7.29□□□□□ -1.24
USP11P51784 AP002963.1-201ENST00000530590 184 ntBASIC7.29□□□□□ -1.24
USP11P51784 AKIRIN1P1-201ENST00000547384 544 ntBASIC7.29□□□□□ -1.24
USP11P51784 ADI1P3-201ENST00000549509 470 ntBASIC7.29□□□□□ -1.24
USP11P51784 NBEAP1-201ENST00000554452 979 ntBASIC7.29□□□□□ -1.24
USP11P51784 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.29□□□□□ -1.24
USP11P51784 AC074051.3-201ENST00000570238 358 ntBASIC7.29□□□□□ -1.24
USP11P51784 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.29□□□□□ -1.24
USP11P51784 AC073333.2-201ENST00000603589 769 ntBASIC7.29□□□□□ -1.24
USP11P51784 MTCYBP22-201ENST00000603788 447 ntBASIC7.29□□□□□ -1.24
USP11P51784 AL683813.2-201ENST00000605245 502 ntBASIC7.29□□□□□ -1.24
USP11P51784 AP001330.5-201ENST00000607176 411 ntBASIC7.29□□□□□ -1.24
USP11P51784 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.29□□□□□ -1.24
USP11P51784 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
USP11P51784 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms