Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
TM4SF4P48230 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
TM4SF4P48230 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 RNVU1-6-201ENST00000364688 164 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 RNU6-1263P-201ENST00000384601 106 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.47□□□□□ -1.37
TM4SF4P48230 AC093084.1-201ENST00000424233 687 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC6.47□□□□□ -1.37
TM4SF4P48230 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.47□□□□□ -1.37
TM4SF4P48230 AL022319.1-201ENST00000458183 1167 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 LARP7P4-201ENST00000481075 878 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 RN7SL205P-201ENST00000490174 284 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 PRELID3BP5-201ENST00000508612 460 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.47□□□□□ -1.37
TM4SF4P48230 AC034244.2-201ENST00000514668 858 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.47□□□□□ -1.37
TM4SF4P48230 BNIP3P1-201ENST00000547295 580 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 AC063949.1-201ENST00000552900 865 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 RN7SL52P-201ENST00000584271 284 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 AC011447.4-201ENST00000587562 111 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 AC019131.2-201ENST00000609071 870 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 AL355974.3-201ENST00000617383 467 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 RN7SL722P-201ENST00000617780 284 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 RN7SL565P-201ENST00000618246 284 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 AC090527.3-201ENST00000619041 548 ntBASIC6.47□□□□□ -1.37
TM4SF4P48230 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.47□□□□□ -1.37
TM4SF4P48230 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
TM4SF4P48230 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
TM4SF4P48230 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TM4SF4P48230 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
TM4SF4P48230 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.46□□□□□ -1.37
TM4SF4P48230 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TM4SF4P48230 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
TM4SF4P48230 AC008957.3-201ENST00000624112 2242 ntBASIC6.46□□□□□ -1.37
TM4SF4P48230 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
TM4SF4P48230 HSPD1P7-201ENST00000447985 1686 ntBASIC6.46□□□□□ -1.37
TM4SF4P48230 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.46□□□□□ -1.37
TM4SF4P48230 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TM4SF4P48230 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF4P48230 RN7SKP104-201ENST00000362605 328 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF4P48230 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF4P48230 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 SCAND3P1-201ENST00000439854 1060 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AC009963.4-201ENST00000448535 339 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 MTND2P6-201ENST00000455337 1030 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF4P48230 EIF2S2P5-201ENST00000457635 968 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 RN7SL481P-201ENST00000477764 299 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF4P48230 MTCO2P9-201ENST00000503214 694 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF4P48230 RN7SKP288-201ENST00000516227 268 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 RNU6-941P-201ENST00000516346 108 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 RN7SKP147-201ENST00000517154 244 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF4P48230 KCTD9P4-201ENST00000526766 1166 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC015911.5-201ENST00000587076 451 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC109583.2-201ENST00000617367 129 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AL034546.1-201ENST00000623740 3693 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC074101.1-201ENST00000637861 241 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF4P48230 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF4P48230 AC104162.1-201ENST00000430831 2382 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 AL136520.1-201ENST00000600311 1322 ntBASIC6.46□□□□□ -1.38
TM4SF4P48230 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TM4SF4P48230 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.38
TM4SF4P48230 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.46□□□□□ -1.38
TM4SF4P48230 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TM4SF4P48230 OLMALINC-203ENST00000641087 3779 ntBASIC6.45□□□□□ -1.38
TM4SF4P48230 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TM4SF4P48230 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms