Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 OR4A46P-201ENST00000527255 933 ntBASIC5.11□□□□□ -1.59
GABRA4P48169 AC079064.1-201ENST00000528365 362 ntBASIC5.11□□□□□ -1.59
GABRA4P48169 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
GABRA4P48169 AC025857.2-201ENST00000602711 238 ntBASIC5.11□□□□□ -1.59
GABRA4P48169 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.11□□□□□ -1.59
GABRA4P48169 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.11□□□□□ -1.59
GABRA4P48169 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.11□□□□□ -1.59
GABRA4P48169 AC005618.4-201ENST00000625053 554 ntBASIC5.11□□□□□ -1.59
GABRA4P48169 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.11□□□□□ -1.59
GABRA4P48169 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.11□□□□□ -1.59
GABRA4P48169 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.11□□□□□ -1.59
GABRA4P48169 AC109446.4-201ENST00000623235 2755 ntBASIC5.11□□□□□ -1.59
GABRA4P48169 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GABRA4P48169 AC011493.1-201ENST00000596753 1632 ntBASIC5.11□□□□□ -1.59
GABRA4P48169 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GABRA4P48169 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
GABRA4P48169 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GABRA4P48169 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
GABRA4P48169 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.1□□□□□ -1.59
GABRA4P48169 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
GABRA4P48169 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.1□□□□□ -1.59
GABRA4P48169 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.1□□□□□ -1.59
GABRA4P48169 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 DUTP5-201ENST00000406790 469 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
GABRA4P48169 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.1□□□□□ -1.59
GABRA4P48169 VTI1BP4-201ENST00000427516 527 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.1□□□□□ -1.59
GABRA4P48169 LYPLA1P1-201ENST00000434514 622 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.1□□□□□ -1.59
GABRA4P48169 AC104634.1-201ENST00000452720 462 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 SEPT7P3-201ENST00000455017 621 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GABRA4P48169 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.1□□□□□ -1.59
GABRA4P48169 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
GABRA4P48169 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.1□□□□□ -1.59
GABRA4P48169 AP005435.3-201ENST00000531260 3198 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 OR4A43P-201ENST00000532938 908 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.1□□□□□ -1.59
GABRA4P48169 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.1□□□□□ -1.59
GABRA4P48169 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.1□□□□□ -1.59
GABRA4P48169 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 AC074101.1-201ENST00000637861 241 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 SAMMSON-227ENST00000642114 1199 ntBASIC5.1□□□□□ -1.59
GABRA4P48169 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.1□□□□□ -1.59
GABRA4P48169 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
GABRA4P48169 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.1□□□□□ -1.59
GABRA4P48169 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.09□□□□□ -1.59
GABRA4P48169 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
GABRA4P48169 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
GABRA4P48169 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GABRA4P48169 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 AC114774.1-201ENST00000507410 1770 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.09□□□□□ -1.59
GABRA4P48169 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GABRA4P48169 U8.4-201ENST00000363626 134 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 RNU1-43P-201ENST00000365052 165 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 U3.28-201ENST00000391249 210 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 EI24P3-201ENST00000399046 1062 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC002524.1-201ENST00000411687 547 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.09□□□□□ -1.59
GABRA4P48169 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.09□□□□□ -1.59
GABRA4P48169 BRWD1P3-201ENST00000428816 390 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 RPL12P18-201ENST00000437175 325 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.09□□□□□ -1.59
GABRA4P48169 AURKAPS1-201ENST00000451805 1212 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AL389915.2-201ENST00000454576 441 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 PSAT1P4-201ENST00000466500 526 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 RN7SL423P-201ENST00000486202 304 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.09□□□□□ -1.59
GABRA4P48169 SEPT10P1-201ENST00000517342 1162 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.09□□□□□ -1.59
GABRA4P48169 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.09□□□□□ -1.59
GABRA4P48169 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.09□□□□□ -1.59
GABRA4P48169 HAUS8P1-201ENST00000549005 542 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC051619.2-201ENST00000559063 397 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.09□□□□□ -1.59
GABRA4P48169 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 OR51C1P-201ENST00000608504 942 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC244107.2-201ENST00000611773 76 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AL139407.1-201ENST00000613826 1175 ntBASIC5.09□□□□□ -1.59
GABRA4P48169 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.09□□□□□ -1.59
GABRA4P48169 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABRA4P48169 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms