Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 AC114774.1-201ENST00000507410 1770 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.51□□□□□ -1.53
HNF4AP41235 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HNF4AP41235 AC005005.4-201ENST00000623789 16698 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.5□□□□□ -1.53
HNF4AP41235 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.5□□□□□ -1.53
HNF4AP41235 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HNF4AP41235 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.5□□□□□ -1.53
HNF4AP41235 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.5□□□□□ -1.53
HNF4AP41235 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HNF4AP41235 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.5□□□□□ -1.53
HNF4AP41235 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HNF4AP41235 OR52B3P-201ENST00000314715 928 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.5□□□□□ -1.53
HNF4AP41235 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HNF4AP41235 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.5□□□□□ -1.53
HNF4AP41235 OR6K4P-201ENST00000423179 955 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.5□□□□□ -1.53
HNF4AP41235 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.5□□□□□ -1.53
HNF4AP41235 TMEM183AP1-205ENST00000432739 290 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 HMGB3P24-201ENST00000433260 622 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 MTCYBP29-201ENST00000436327 1006 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 RPS10P18-201ENST00000442662 495 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.5□□□□□ -1.53
HNF4AP41235 AC073610.1-201ENST00000489971 396 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 OR52A4P-203ENST00000498233 1014 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.5□□□□□ -1.53
HNF4AP41235 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.5□□□□□ -1.53
HNF4AP41235 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 AC021678.3-201ENST00000517893 476 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 HMGB1P42-201ENST00000532126 553 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HNF4AP41235 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.5□□□□□ -1.53
HNF4AP41235 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.5□□□□□ -1.53
HNF4AP41235 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.5□□□□□ -1.53
HNF4AP41235 DHFRP1-201ENST00000579682 559 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 AC015802.2-201ENST00000589690 189 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.5□□□□□ -1.53
HNF4AP41235 MIR6861-201ENST00000618657 64 ntBASIC5.5□□□□□ -1.53
HNF4AP41235 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.5□□□□□ -1.53
HNF4AP41235 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HNF4AP41235 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
HNF4AP41235 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HNF4AP41235 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.5□□□□□ -1.53
HNF4AP41235 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.49□□□□□ -1.53
HNF4AP41235 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 SPATA2P1-201ENST00000431223 2055 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.49□□□□□ -1.53
HNF4AP41235 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HNF4AP41235 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.49□□□□□ -1.53
HNF4AP41235 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 AL159987.1-201ENST00000347911 293 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HNF4AP41235 AC023490.2-201ENST00000359859 470 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.49□□□□□ -1.53
HNF4AP41235 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.49□□□□□ -1.53
HNF4AP41235 OR7E101P-201ENST00000400428 513 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 SLC20A1P1-201ENST00000413906 956 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 CYCSP11-201ENST00000436426 315 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 PA2G4P6-201ENST00000438325 1197 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 VN1R48P-201ENST00000448149 1036 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.49□□□□□ -1.53
HNF4AP41235 AC011476.1-201ENST00000466725 307 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HNF4AP41235 ATP5LP5-201ENST00000483050 299 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 AC009120.1-201ENST00000493458 473 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.49□□□□□ -1.53
HNF4AP41235 NENFP3-201ENST00000503735 313 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.49□□□□□ -1.53
HNF4AP41235 BTG4P1-201ENST00000510421 183 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.49□□□□□ -1.53
HNF4AP41235 SNORA70.20-201ENST00000516848 126 ntBASIC5.49□□□□□ -1.53
HNF4AP41235 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.49□□□□□ -1.53
HNF4AP41235 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms