Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CASC19-248ENST00000641674 1356 ntBASIC5.36□□□□□ -1.55
RPA3P35244 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.36□□□□□ -1.55
RPA3P35244 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 AC090220.1-201ENST00000593078 1699 ntBASIC5.36□□□□□ -1.55
RPA3P35244 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPA3P35244 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPA3P35244 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.35□□□□□ -1.55
RPA3P35244 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RPA3P35244 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
RPA3P35244 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 AL078595.2-201ENST00000605309 1780 ntBASIC5.35□□□□□ -1.55
RPA3P35244 AC025574.1-201ENST00000554784 1653 ntBASIC5.35□□□□□ -1.55
RPA3P35244 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.35□□□□□ -1.55
RPA3P35244 RN7SKP16-201ENST00000410180 299 ntBASIC5.35□□□□□ -1.55
RPA3P35244 Z93019.1-201ENST00000416450 973 ntBASIC5.35□□□□□ -1.55
RPA3P35244 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.35□□□□□ -1.55
RPA3P35244 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.35□□□□□ -1.55
RPA3P35244 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.35□□□□□ -1.55
RPA3P35244 AP000281.1-201ENST00000444036 316 ntBASIC5.35□□□□□ -1.55
RPA3P35244 RPS27AP2-201ENST00000457576 465 ntBASIC5.35□□□□□ -1.55
RPA3P35244 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 AC069304.1-201ENST00000491593 704 ntBASIC5.35□□□□□ -1.55
RPA3P35244 AP006245.2-201ENST00000522004 300 ntBASIC5.35□□□□□ -1.55
RPA3P35244 AC006349.1-201ENST00000555526 235 ntBASIC5.35□□□□□ -1.55
RPA3P35244 MIR1273E-201ENST00000581165 102 ntBASIC5.35□□□□□ -1.55
RPA3P35244 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.35□□□□□ -1.55
RPA3P35244 AC009027.1-201ENST00000604510 479 ntBASIC5.35□□□□□ -1.55
RPA3P35244 AC104695.2-201ENST00000605056 775 ntBASIC5.35□□□□□ -1.55
RPA3P35244 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 AC004477.3-201ENST00000614061 590 ntBASIC5.35□□□□□ -1.55
RPA3P35244 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.35□□□□□ -1.55
RPA3P35244 AC132068.1-201ENST00000623805 459 ntBASIC5.35□□□□□ -1.55
RPA3P35244 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RPA3P35244 AC006600.2-201ENST00000624834 2506 ntBASIC5.35□□□□□ -1.55
RPA3P35244 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.35□□□□□ -1.55
RPA3P35244 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RPA3P35244 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
RPA3P35244 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 RNA5SP319-201ENST00000362768 119 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 RN7SKP293-201ENST00000411389 296 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 AC046176.1-201ENST00000435260 1170 ntBASIC5.34□□□□□ -1.55
RPA3P35244 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.34□□□□□ -1.55
RPA3P35244 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 NOP56P2-201ENST00000447491 769 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.34□□□□□ -1.55
RPA3P35244 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 RPSAP39-201ENST00000467439 883 ntBASIC5.34□□□□□ -1.55
RPA3P35244 RN7SL51P-201ENST00000468230 285 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AC092754.1-201ENST00000472975 479 ntBASIC5.34□□□□□ -1.55
RPA3P35244 RN7SL814P-201ENST00000487715 300 ntBASIC5.34□□□□□ -1.55
RPA3P35244 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 AC022360.1-201ENST00000521058 340 ntBASIC5.34□□□□□ -1.55
RPA3P35244 IGKV3D-34-201ENST00000522638 302 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 AC015720.2-201ENST00000567709 334 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.34□□□□□ -1.55
RPA3P35244 OR51C1P-201ENST00000608504 942 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AL118522.2-201ENST00000616045 615 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AC109583.2-201ENST00000617367 129 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 AC073869.10-201ENST00000642016 354 ntBASIC5.34□□□□□ -1.55
RPA3P35244 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RPA3P35244 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RPA3P35244 HSPA8P14-201ENST00000552265 1805 ntBASIC5.34□□□□□ -1.55
RPA3P35244 AC000374.1-201ENST00000434698 1745 ntBASIC5.34□□□□□ -1.56
RPA3P35244 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
RPA3P35244 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RPA3P35244 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms