Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LIG1P18858 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LIG1P18858 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
LIG1P18858 U6.112-201ENST00000384129 70 ntBASIC7.42□□□□□ -1.22
LIG1P18858 RNU6-1005P-201ENST00000384519 107 ntBASIC7.42□□□□□ -1.22
LIG1P18858 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 AC007068.1-201ENST00000396690 844 ntBASIC7.42□□□□□ -1.22
LIG1P18858 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 RNA5SP251-201ENST00000410614 137 ntBASIC7.42□□□□□ -1.22
LIG1P18858 CDC42P6-201ENST00000421246 576 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AL593851.1-201ENST00000426171 157 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AL353572.1-201ENST00000442490 417 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 MRPL35P2-201ENST00000448009 511 ntBASIC7.42□□□□□ -1.22
LIG1P18858 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 BUD31P2-201ENST00000449374 300 ntBASIC7.42□□□□□ -1.22
LIG1P18858 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 AC093899.1-201ENST00000457984 376 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AC010460.1-201ENST00000507087 466 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.42□□□□□ -1.22
LIG1P18858 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 RNU6-1178P-201ENST00000516674 107 ntBASIC7.42□□□□□ -1.22
LIG1P18858 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.42□□□□□ -1.22
LIG1P18858 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.42□□□□□ -1.22
LIG1P18858 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AP000619.2-201ENST00000546014 969 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.42□□□□□ -1.22
LIG1P18858 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 NPM1P5-201ENST00000557228 838 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 MIR4789-201ENST00000577469 82 ntBASIC7.42□□□□□ -1.22
LIG1P18858 CBX3P2-202ENST00000583365 535 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AC090616.2-202ENST00000584248 222 ntBASIC7.42□□□□□ -1.22
LIG1P18858 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 AC072039.2-201ENST00000608883 439 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 AL590240.3-201ENST00000621416 943 ntBASIC7.42□□□□□ -1.22
LIG1P18858 AL160394.1-201ENST00000624765 724 ntBASIC7.42□□□□□ -1.22
LIG1P18858 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 AC023245.2-201ENST00000530760 2978 ntBASIC7.42□□□□□ -1.22
LIG1P18858 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
LIG1P18858 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC7.42□□□□□ -1.22
LIG1P18858 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.42□□□□□ -1.22
LIG1P18858 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
LIG1P18858 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.42□□□□□ -1.22
LIG1P18858 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
LIG1P18858 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 PROS2P-201ENST00000474651 1951 ntBASIC7.41□□□□□ -1.22
LIG1P18858 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LIG1P18858 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
LIG1P18858 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LIG1P18858 AC023490.2-201ENST00000359859 470 ntBASIC7.41□□□□□ -1.22
LIG1P18858 SNORD8-201ENST00000363915 110 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 UBBP1-201ENST00000392399 473 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AL590084.1-201ENST00000407885 387 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC7.41□□□□□ -1.22
LIG1P18858 SPATA20P1-201ENST00000423089 438 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.41□□□□□ -1.22
LIG1P18858 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.41□□□□□ -1.22
LIG1P18858 GAPDHP20-201ENST00000444107 1007 ntBASIC7.41□□□□□ -1.22
LIG1P18858 AC092601.1-201ENST00000444526 383 ntBASIC7.41□□□□□ -1.22
LIG1P18858 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms