Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 NIP7P2-201ENST00000485801 544 ntBASIC8.81□□□□□ -1
CFTRP13569 RN7SL244P-201ENST00000493405 297 ntBASIC8.81□□□□□ -1
CFTRP13569 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC8.81□□□□□ -1
CFTRP13569 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC8.81□□□□□ -1
CFTRP13569 MAL2-201ENST00000522112 573 ntTSL 4 BASIC8.81□□□□□ -1
CFTRP13569 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC8.81□□□□□ -1
CFTRP13569 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8.81□□□□□ -1
CFTRP13569 AL110118.1-201ENST00000553543 400 ntBASIC8.81□□□□□ -1
CFTRP13569 CR381572.2-201ENST00000624852 397 ntBASIC8.81□□□□□ -1
CFTRP13569 AC068724.3-201ENST00000625906 87 ntBASIC8.81□□□□□ -1
CFTRP13569 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.81□□□□□ -1
CFTRP13569 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
CFTRP13569 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CFTRP13569 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.8□□□□□ -1
CFTRP13569 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
CFTRP13569 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
CFTRP13569 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
CFTRP13569 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.8□□□□□ -1
CFTRP13569 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC8.8□□□□□ -1
CFTRP13569 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.8□□□□□ -1
CFTRP13569 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
CFTRP13569 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
CFTRP13569 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC8.8□□□□□ -1
CFTRP13569 RSU1P3-201ENST00000412878 835 ntBASIC8.8□□□□□ -1
CFTRP13569 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.8□□□□□ -1
CFTRP13569 RPL23AP1-201ENST00000428990 471 ntBASIC8.8□□□□□ -1
CFTRP13569 RPS29P9-201ENST00000440360 171 ntBASIC8.8□□□□□ -1
CFTRP13569 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.8□□□□□ -1
CFTRP13569 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.8□□□□□ -1
CFTRP13569 SCARNA22-201ENST00000503991 125 ntBASIC8.8□□□□□ -1
CFTRP13569 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC8.8□□□□□ -1
CFTRP13569 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC8.8□□□□□ -1
CFTRP13569 OR5M2P-201ENST00000529003 936 ntBASIC8.8□□□□□ -1
CFTRP13569 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC8.8□□□□□ -1
CFTRP13569 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC8.8□□□□□ -1
CFTRP13569 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.8□□□□□ -1
CFTRP13569 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
CFTRP13569 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.8□□□□□ -1
CFTRP13569 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
CFTRP13569 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.8□□□□□ -1
CFTRP13569 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.79□□□□□ -1
CFTRP13569 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC8.79□□□□□ -1
CFTRP13569 AC079097.1-201ENST00000512187 1399 ntBASIC8.79□□□□□ -1
CFTRP13569 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CFTRP13569 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CFTRP13569 RNU4-25P-201ENST00000410569 230 ntBASIC8.79□□□□□ -1
CFTRP13569 AL161722.2-201ENST00000434731 981 ntBASIC8.79□□□□□ -1
CFTRP13569 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC8.79□□□□□ -1
CFTRP13569 TCEA1P1-201ENST00000449716 880 ntBASIC8.79□□□□□ -1
CFTRP13569 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.79□□□□□ -1
CFTRP13569 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.79□□□□□ -1
CFTRP13569 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.79□□□□□ -1
CFTRP13569 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.79□□□□□ -1
CFTRP13569 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC8.79□□□□□ -1
CFTRP13569 AP001880.2-201ENST00000538233 448 ntBASIC8.79□□□□□ -1
CFTRP13569 AC018558.5-201ENST00000565840 952 ntBASIC8.79□□□□□ -1
CFTRP13569 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC8.79□□□□□ -1
CFTRP13569 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.79□□□□□ -1
CFTRP13569 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC8.79□□□□□ -1
CFTRP13569 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CFTRP13569 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
CFTRP13569 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
CFTRP13569 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.79□□□□□ -1
CFTRP13569 AC015799.1-201ENST00000622996 3122 ntBASIC8.79□□□□□ -1
CFTRP13569 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
CFTRP13569 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CFTRP13569 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CFTRP13569 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CFTRP13569 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CFTRP13569 AL049697.2-201ENST00000403708 294 ntBASIC8.78□□□□□ -1
CFTRP13569 AC005154.2-201ENST00000438110 379 ntBASIC8.78□□□□□ -1
CFTRP13569 TXNP5-201ENST00000441043 315 ntBASIC8.78□□□□□ -1
CFTRP13569 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.78□□□□□ -1
CFTRP13569 AC027667.1-201ENST00000545814 304 ntBASIC8.78□□□□□ -1
CFTRP13569 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC8.78□□□□□ -1
CFTRP13569 AC108738.1-201ENST00000603703 237 ntBASIC8.78□□□□□ -1
CFTRP13569 AC245389.2-201ENST00000616023 576 ntBASIC8.78□□□□□ -1
CFTRP13569 AC242843.1-201ENST00000618702 573 ntBASIC8.78□□□□□ -1
CFTRP13569 AC021106.3-201ENST00000623925 531 ntBASIC8.78□□□□□ -1
CFTRP13569 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
CFTRP13569 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC8.78□□□□□ -1
CFTRP13569 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC8.78□□□□□ -1
CFTRP13569 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC8.78□□□□□ -1
CFTRP13569 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.78□□□□□ -1
CFTRP13569 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC8.78□□□□□ -1
CFTRP13569 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC8.78□□□□□ -1
CFTRP13569 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.77□□□□□ -1
CFTRP13569 OR4K15-201ENST00000305051 1216 ntBASIC8.77□□□□□ -1
CFTRP13569 RNA5SP515-201ENST00000364570 118 ntBASIC8.77□□□□□ -1
CFTRP13569 MIR589-201ENST00000385238 99 ntBASIC8.77□□□□□ -1
CFTRP13569 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.77□□□□□ -1
CFTRP13569 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
CFTRP13569 RPS26P38-201ENST00000414476 348 ntBASIC8.77□□□□□ -1
CFTRP13569 AF186996.5-201ENST00000418098 904 ntBASIC8.77□□□□□ -1
CFTRP13569 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC8.77□□□□□ -1
CFTRP13569 AC092651.1-201ENST00000426110 312 ntBASIC8.77□□□□□ -1
CFTRP13569 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.77□□□□□ -1
CFTRP13569 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.77□□□□□ -1
CFTRP13569 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC8.77□□□□□ -1
CFTRP13569 RN7SL319P-201ENST00000480656 221 ntBASIC8.77□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms