Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT3P12035 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.7□□□□□ -1.5
KRT3P12035 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 GPS2P1-201ENST00000411761 986 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.7□□□□□ -1.5
KRT3P12035 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.7□□□□□ -1.5
KRT3P12035 AL390119.1-201ENST00000440329 312 ntBASIC5.7□□□□□ -1.5
KRT3P12035 PCNPP2-201ENST00000441651 455 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AP000281.1-201ENST00000444036 316 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AL672138.1-201ENST00000450604 1015 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT3P12035 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
KRT3P12035 AC092754.1-201ENST00000472975 479 ntBASIC5.7□□□□□ -1.5
KRT3P12035 OR2A3P-201ENST00000493774 953 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AP001960.1-201ENST00000506494 658 ntBASIC5.7□□□□□ -1.5
KRT3P12035 MTATP6P1-201ENST00000514057 681 ntBASIC5.7□□□□□ -1.5
KRT3P12035 RN7SKP5-201ENST00000517045 272 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT3P12035 AC025857.1-201ENST00000525252 377 ntBASIC5.7□□□□□ -1.5
KRT3P12035 TRAV11-201ENST00000539512 339 ntBASIC5.7□□□□□ -1.5
KRT3P12035 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT3P12035 AC022404.1-201ENST00000555320 273 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT3P12035 AC010503.3-201ENST00000594355 540 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AC108738.1-201ENST00000603703 237 ntBASIC5.7□□□□□ -1.5
KRT3P12035 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.7□□□□□ -1.5
KRT3P12035 AC126175.1-201ENST00000617041 758 ntBASIC5.7□□□□□ -1.5
KRT3P12035 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT3P12035 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.7□□□□□ -1.5
KRT3P12035 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 MUC2-202ENST00000613187 4845 ntBASIC5.7□□□□□ -1.5
KRT3P12035 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT3P12035 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT3P12035 AL138820.1-201ENST00000617901 5305 ntBASIC5.7□□□□□ -1.5
KRT3P12035 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT3P12035 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KRT3P12035 AL353796.1-201ENST00000561542 3241 ntBASIC5.7□□□□□ -1.5
KRT3P12035 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
KRT3P12035 AL022322.2-201ENST00000624072 20397 ntBASIC5.7□□□□□ -1.5
KRT3P12035 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
KRT3P12035 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.69□□□□□ -1.5
KRT3P12035 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 TCP11X1-202ENST00000622971 1372 ntBASIC5.69□□□□□ -1.5
KRT3P12035 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.69□□□□□ -1.5
KRT3P12035 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 RNA5SP319-201ENST00000362768 119 ntBASIC5.69□□□□□ -1.5
KRT3P12035 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
KRT3P12035 GABARAPL3-201ENST00000412799 354 ntBASIC5.69□□□□□ -1.5
KRT3P12035 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.69□□□□□ -1.5
KRT3P12035 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 SRSF1P1-201ENST00000424058 520 ntBASIC5.69□□□□□ -1.5
KRT3P12035 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 AC104843.2-201ENST00000427666 297 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.69□□□□□ -1.5
KRT3P12035 AC105399.1-202ENST00000447303 205 ntBASIC5.69□□□□□ -1.5
KRT3P12035 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.69□□□□□ -1.5
KRT3P12035 FCF1P7-201ENST00000451185 558 ntBASIC5.69□□□□□ -1.5
KRT3P12035 RN7SL51P-201ENST00000468230 285 ntBASIC5.69□□□□□ -1.5
KRT3P12035 RPL12P24-201ENST00000474907 486 ntBASIC5.69□□□□□ -1.5
KRT3P12035 RN7SL273P-201ENST00000481561 299 ntBASIC5.69□□□□□ -1.5
KRT3P12035 RPSAP51-201ENST00000497462 645 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC090638.1-201ENST00000498296 909 ntBASIC5.69□□□□□ -1.5
KRT3P12035 IGBP1P4-201ENST00000503202 879 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.69□□□□□ -1.5
KRT3P12035 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 HMGB1P44-201ENST00000508597 572 ntBASIC5.69□□□□□ -1.5
KRT3P12035 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 AC021193.1-201ENST00000511607 420 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.69□□□□□ -1.5
KRT3P12035 HMGN1P9-201ENST00000515212 298 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC008676.3-201ENST00000521237 435 ntBASIC5.69□□□□□ -1.5
KRT3P12035 OR4A43P-201ENST00000532938 908 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.69□□□□□ -1.5
KRT3P12035 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.69□□□□□ -1.5
KRT3P12035 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 AL356608.1-201ENST00000610034 820 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC244107.2-201ENST00000611773 76 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AP003400.2-201ENST00000624036 666 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC103703.1-201ENST00000634783 663 ntBASIC5.69□□□□□ -1.5
KRT3P12035 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.69□□□□□ -1.5
KRT3P12035 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 AC007342.5-201ENST00000571340 2142 ntBASIC5.69□□□□□ -1.5
KRT3P12035 Z83820.1-201ENST00000456978 1499 ntBASIC5.69□□□□□ -1.5
KRT3P12035 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
KRT3P12035 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KRT3P12035 Z95331.1-201ENST00000623075 23112 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms