Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 CRIP1P3-201ENST00000416794 220 ntBASIC8.3□□□□□ -1.08
RNF40O75150 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF40O75150 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF40O75150 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF40O75150 MTCYBP9-201ENST00000431021 303 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AL513175.1-201ENST00000431492 780 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 OR51P1P-201ENST00000447547 942 ntBASIC8.3□□□□□ -1.08
RNF40O75150 RPL7P14-201ENST00000449851 741 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 RNU6-1208P-201ENST00000459588 107 ntBASIC8.3□□□□□ -1.08
RNF40O75150 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF40O75150 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF40O75150 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 AC091839.1-201ENST00000513087 269 ntBASIC8.3□□□□□ -1.08
RNF40O75150 NTAN1P2-201ENST00000515730 940 ntBASIC8.3□□□□□ -1.08
RNF40O75150 Y_RNA.691-201ENST00000516611 103 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 OR5B19P-201ENST00000531766 928 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.3□□□□□ -1.08
RNF40O75150 RPL23AP90-201ENST00000603820 236 ntBASIC8.3□□□□□ -1.08
RNF40O75150 RN7SL840P-201ENST00000606883 284 ntBASIC8.3□□□□□ -1.08
RNF40O75150 OR6L2P-201ENST00000608207 925 ntBASIC8.3□□□□□ -1.08
RNF40O75150 RN7SL82P-201ENST00000611435 237 ntBASIC8.3□□□□□ -1.08
RNF40O75150 RN7SL628P-201ENST00000619139 237 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF40O75150 AL683826.1-201ENST00000624104 627 ntBASIC8.3□□□□□ -1.08
RNF40O75150 AL034408.1-201ENST00000637712 664 ntBASIC8.3□□□□□ -1.08
RNF40O75150 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF40O75150 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF40O75150 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.3□□□□□ -1.08
RNF40O75150 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.3□□□□□ -1.08
RNF40O75150 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
RNF40O75150 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.3□□□□□ -1.08
RNF40O75150 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 ZNF710-AS1-202ENST00000620791 2133 ntBASIC8.29□□□□□ -1.08
RNF40O75150 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
RNF40O75150 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 OR5J1P-201ENST00000313544 939 ntBASIC8.29□□□□□ -1.08
RNF40O75150 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 SNORD46-201ENST00000364043 104 ntBASIC8.29□□□□□ -1.08
RNF40O75150 RNU6-1322P-201ENST00000364309 107 ntBASIC8.29□□□□□ -1.08
RNF40O75150 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RNF40O75150 AC008171.1-201ENST00000395058 200 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AL161909.1-201ENST00000397390 712 ntBASIC8.29□□□□□ -1.08
RNF40O75150 TXNP7-201ENST00000406296 293 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 HMGB1P11-201ENST00000413899 637 ntBASIC8.29□□□□□ -1.08
RNF40O75150 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 AC011747.1-201ENST00000425678 565 ntTSL 4 BASIC8.29□□□□□ -1.08
RNF40O75150 DYNLL1P7-201ENST00000429273 258 ntBASIC8.29□□□□□ -1.08
RNF40O75150 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 ANKRD54P1-201ENST00000433115 471 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC8.29□□□□□ -1.08
RNF40O75150 RPL5P25-201ENST00000441148 775 ntBASIC8.29□□□□□ -1.08
RNF40O75150 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 AL929410.2-201ENST00000451170 189 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC8.29□□□□□ -1.08
RNF40O75150 RN7SL213P-201ENST00000463482 317 ntBASIC8.29□□□□□ -1.08
RNF40O75150 RN7SL12P-201ENST00000473849 290 ntBASIC8.29□□□□□ -1.08
RNF40O75150 RN7SL338P-201ENST00000481467 293 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC8.29□□□□□ -1.08
RNF40O75150 AC021220.1-201ENST00000507445 630 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 RPL7L1P13-201ENST00000511702 739 ntBASIC8.29□□□□□ -1.08
RNF40O75150 RPL7L1P4-201ENST00000513004 707 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC112206.3-201ENST00000514578 389 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC026801.2-201ENST00000515352 425 ntBASIC8.29□□□□□ -1.08
RNF40O75150 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC8.29□□□□□ -1.08
RNF40O75150 IGHV7-40-201ENST00000520963 296 ntBASIC8.29□□□□□ -1.08
RNF40O75150 AC083923.1-201ENST00000523708 376 ntBASIC8.29□□□□□ -1.08
RNF40O75150 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms