Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPS3AP15-201ENST00000483874 781 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 NENFP3-201ENST00000503735 313 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 TPT1P8-201ENST00000510120 555 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 OR1AB1P-201ENST00000585564 761 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC005242.1-201ENST00000585658 438 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 QTRT1P1-201ENST00000604344 1078 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC015849.2-201ENST00000605738 409 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC025574.2-201ENST00000615621 514 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 AC003973.3-201ENST00000624863 2822 ntBASIC5.66□□□□□ -1.5
TCRBV7S3A2A0A539 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AL161901.1-201ENST00000624954 3425 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 RNU6-1251P-201ENST00000364502 107 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 PPIAP9-201ENST00000403866 498 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC092570.3-201ENST00000420113 693 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 MTCYBP32-201ENST00000427945 1084 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC046176.1-201ENST00000435260 1170 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 CLIC4P1-201ENST00000453177 535 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 HLA-DPA3-207ENST00000454398 229 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC022215.1-201ENST00000481770 362 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 PPP1R11P1-201ENST00000486095 376 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 RNA5SP473-201ENST00000516402 125 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 HMGB1P46-201ENST00000520062 610 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 OSBPL9P3-201ENST00000534523 595 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AP004372.1-201ENST00000604842 844 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 RN7SL544P-201ENST00000617232 284 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AP005431.1-201ENST00000618479 319 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 RN7SL763P-201ENST00000620922 284 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 AP001052.1-201ENST00000626421 99 ntBASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
TCRBV7S3A2A0A539 CASC19-261ENST00000641853 1638 ntBASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 SRRM1P3-201ENST00000426911 2678 ntBASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 NEPNP-201ENST00000404786 1371 ntBASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TCRBV7S3A2A0A539 AC100757.1-201ENST00000616872 1835 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 SNORA5.1-201ENST00000384275 131 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 RNU6-1257P-201ENST00000384625 110 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 OR7E101P-201ENST00000400428 513 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC245060.4-201ENST00000413293 1121 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 VN1R37P-201ENST00000419096 748 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AL022331.1-201ENST00000429025 477 ntBASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.64□□□□□ -1.51
TCRBV7S3A2A0A539 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms