Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC024940.4-201ENST00000605507 246 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 AL136131.3-201ENST00000607600 188 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC009120.7-201ENST00000623452 780 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 OR7A1P-202ENST00000641542 1158 ntBASIC8.09□□□□□ -1.11
USP35Q9P2H5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 NSF-206ENST00000575068 2667 ntTSL 2 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC8.09□□□□□ -1.11
USP35Q9P2H5 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
USP35Q9P2H5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
USP35Q9P2H5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.12
USP35Q9P2H5 AC079753.1-201ENST00000623243 3868 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC015799.1-201ENST00000622996 3122 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 RNA5SP500-201ENST00000364486 119 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 RPL23AP17-201ENST00000401064 499 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AL445213.1-201ENST00000412589 747 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 RNFT1P2-201ENST00000443064 757 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 CYCSP51-201ENST00000443545 318 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 RN7SL57P-201ENST00000493687 290 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 RNA5SP92-201ENST00000516437 110 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC079880.2-201ENST00000603790 1213 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 MIR8084-201ENST00000614105 89 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AC010872.1-201ENST00000624225 675 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.08□□□□□ -1.12
USP35Q9P2H5 AL442128.2-201ENST00000620246 1824 ntBASIC8.08□□□□□ -1.12
USP35Q9P2H5 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
USP35Q9P2H5 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 AC005725.1-201ENST00000577346 2607 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 GNG5P2-201ENST00000372054 207 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 GCNT6-201ENST00000379591 934 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 HMGB1P10-201ENST00000395823 563 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 AC136624.1-201ENST00000400791 413 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 AL035405.1-201ENST00000400795 710 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 MRM2-202ENST00000407040 582 ntTSL 3 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 OR5W1P-201ENST00000423705 938 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.07□□□□□ -1.12
USP35Q9P2H5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
USP35Q9P2H5 CLIC4P1-201ENST00000453177 535 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 AC008953.1-201ENST00000497334 318 ntBASIC8.07□□□□□ -1.12
USP35Q9P2H5 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms