Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AP001284.1-201ENST00000528393 2118 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 TMSB4XP4-201ENST00000323496 618 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 RN7SKP145-201ENST00000363291 303 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 RNA5SP122-201ENST00000384457 108 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 RNU11-201ENST00000387069 134 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 U3.28-201ENST00000391249 210 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 REREP1Y-201ENST00000422655 198 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 MGAT2P2-201ENST00000427194 797 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC002069.1-201ENST00000429649 1159 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC007563.3-201ENST00000433233 371 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 REREP2Y-201ENST00000439103 200 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC092106.1-201ENST00000444291 373 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC023271.1-201ENST00000445936 1090 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC069277.2-201ENST00000454211 432 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 RN7SL197P-201ENST00000466981 299 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 RN7SL188P-201ENST00000469842 285 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC109481.1-201ENST00000509173 282 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC090568.1-201ENST00000509499 856 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC067904.2-201ENST00000517322 1283 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC079064.1-201ENST00000528365 362 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AL049872.1-201ENST00000556323 322 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC020978.7-201ENST00000575953 1187 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC012616.1-201ENST00000600294 197 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AL360012.1-201ENST00000602813 131 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 MTCO2P22-201ENST00000603246 681 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 LSM1P2-201ENST00000604911 322 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 RN7SL787P-201ENST00000613000 284 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC007683.2-201ENST00000624681 714 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AC103703.1-201ENST00000634783 663 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 SPATA2P1-201ENST00000431223 2055 ntBASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BLOC1S4Q9NUP1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 VPS35P1-201ENST00000563400 1518 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC007342.7-201ENST00000624610 2337 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL591135.1-201ENST00000401578 5914 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL133482.1-201ENST00000415988 498 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC104843.2-201ENST00000427666 297 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 MTCYBP29-201ENST00000436327 1006 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL390119.1-201ENST00000440329 312 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC073465.2-201ENST00000440938 498 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 Z99127.2-201ENST00000441426 334 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AL161636.2-201ENST00000445179 927 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC073909.1-201ENST00000447112 999 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 IGBP1P3-201ENST00000447449 1000 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 RPL31P15-201ENST00000449770 338 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 HSPE1P22-201ENST00000456856 327 ntBASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.15□□□□□ -1.42
BLOC1S4Q9NUP1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms