Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC084337.1-201ENST00000524809 686 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AP003084.1-201ENST00000524828 742 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 SLC25A51P2-201ENST00000535708 889 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 YWHABP2-201ENST00000540201 713 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC090971.3-201ENST00000557871 1041 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 RBM22P12-201ENST00000567098 1255 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 RN7SL270P-201ENST00000579643 281 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC119501.1-201ENST00000603646 475 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC012557.1-201ENST00000607115 611 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC007742.2-201ENST00000618226 398 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 AC011815.3-201ENST00000624194 473 ntBASIC6.71□□□□□ -1.34
SSU72Q9NP77 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.71□□□□□ -1.34
SSU72Q9NP77 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SSU72Q9NP77 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AL512329.1-201ENST00000404600 1592 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 RNA5SP350-201ENST00000363298 111 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 RNU6-348P-201ENST00000384386 107 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 Y_RNA.554-201ENST00000384672 102 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 RNY3P10-201ENST00000384764 102 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 snosnR66.1-201ENST00000391095 99 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SSU72Q9NP77 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AL023284.3-201ENST00000407767 334 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 RNA5SP115-201ENST00000411160 107 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 ATG4AP1-201ENST00000416893 538 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC006065.1-201ENST00000422539 802 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 RPL7P44-201ENST00000424827 742 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 KCTD9P1-201ENST00000430462 1167 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC023512.1-201ENST00000444513 499 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 FAR2P1-206ENST00000449736 709 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 OR52I1-201ENST00000450052 1050 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 GOT2P2-201ENST00000450663 1251 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 TAAR3P-202ENST00000481759 1025 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 RPL23AP80-201ENST00000495605 424 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC016559.1-201ENST00000511420 199 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 TCP11X3P-202ENST00000514289 1254 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC023632.1-201ENST00000518463 375 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 IGHV1-14-201ENST00000523391 241 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 OR8Q1P-201ENST00000526467 655 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AL121839.1-201ENST00000556233 1185 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AP005262.1-201ENST00000582646 997 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 MIR4786-201ENST00000583954 80 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.7□□□□□ -1.34
SSU72Q9NP77 AP001542.2-201ENST00000593141 364 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AL137072.1-201ENST00000603444 466 ntBASIC6.7□□□□□ -1.34
SSU72Q9NP77 AL035417.2-201ENST00000603887 796 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms