Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CYCSP24-201ENST00000445119 316 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 HMGB1P7-201ENST00000450921 612 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AZGP1P2-201ENST00000454506 345 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC113367.2-201ENST00000505749 160 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AL158068.1-201ENST00000506116 616 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 EIF3KP3-201ENST00000514461 639 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 HMGN1P9-201ENST00000515212 298 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 RNA5SP96-201ENST00000516041 107 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 RNU6-513P-201ENST00000516104 104 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AP002373.2-201ENST00000541631 1060 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 HMGN1P26-201ENST00000558737 303 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC040958.1-201ENST00000561102 201 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 MT1CP-201ENST00000567054 174 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 ADAM3B-201ENST00000569937 840 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 MIR4311-201ENST00000580794 100 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 RN7SL230P-201ENST00000580835 303 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC108738.1-201ENST00000603703 237 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 WBP1LP12-201ENST00000604449 331 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC015819.1-201ENST00000613588 663 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC004801.6-201ENST00000616571 978 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC245014.3-201ENST00000618589 347 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 SAMMSON-209ENST00000641222 1100 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 TCP1P3-201ENST00000414406 1498 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC100757.1-201ENST00000616872 1835 ntBASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SND1-IT1Q9HBX3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 PDZK1P1-202ENST00000425209 1350 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC110792.3-201ENST00000595906 1614 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AMELX-201ENST00000348912 737 ntTSL 5 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 RNU4-7P-201ENST00000364758 141 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 EI24P3-201ENST00000399046 1062 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 YWHAZP6-201ENST00000399764 738 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 RN7SKP146-201ENST00000410242 334 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 RN7SKP38-201ENST00000410782 309 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC017019.1-201ENST00000426129 261 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC126120.1-201ENST00000431082 470 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 UBQLN1P1-207ENST00000441056 1169 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 GTF3AP5-201ENST00000442645 697 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC073909.1-201ENST00000447112 999 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AL596266.1-201ENST00000448132 400 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC090804.1-201ENST00000448870 490 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AC022431.1-201ENST00000450941 438 ntBASIC3.64□□□□□ -1.83
SND1-IT1Q9HBX3 AL358876.1-201ENST00000453364 1075 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms