Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AC019185.1-201ENST00000442718 389 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AL672138.1-201ENST00000450604 1015 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 IGBP1P4-201ENST00000503202 879 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 HMGN1P9-201ENST00000515212 298 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 CDC42P3-201ENST00000518493 633 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AL138820.1-201ENST00000617901 5305 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 AC003973.3-201ENST00000624863 2822 ntBASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
LRRC40Q9H9A6 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AL078621.3-201ENST00000623707 2042 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 RNA5SP187-201ENST00000384400 119 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 SNORA48.4-201ENST00000391089 134 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 SNORA79B-201ENST00000410557 148 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 Z93019.1-201ENST00000416450 973 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 VN1R31P-201ENST00000417498 730 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 TRGV7-201ENST00000427089 353 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 MTND6P12-201ENST00000428247 522 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC064862.4-201ENST00000442180 334 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC092754.1-201ENST00000472975 479 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 RN7SKP99-201ENST00000517028 307 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AP000859.1-201ENST00000525536 307 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 OR8G3P-201ENST00000533406 921 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AL358913.1-201ENST00000554342 121 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 RN7SL290P-201ENST00000578661 300 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 RN7SL356P-201ENST00000582228 248 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 MIR4505-201ENST00000582238 73 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC244107.2-201ENST00000611773 76 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC109583.2-201ENST00000617367 129 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 MIR6778-201ENST00000617912 73 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC132068.1-201ENST00000623805 459 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 MAPK10-328ENST00000641553 4009 ntBASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
LRRC40Q9H9A6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 GAPDHP15-201ENST00000398586 975 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms