Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC104581.5-201ENST00000624171 7141 ntBASIC7.62□□□□□ -1.19
TRAIPQ9BWF2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
TRAIPQ9BWF2 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
TRAIPQ9BWF2 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
TRAIPQ9BWF2 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC025125.1-201ENST00000624743 1922 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 RN7SKP130-201ENST00000364924 301 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 RN7SKP189-201ENST00000365042 330 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 SNORD94-201ENST00000386037 137 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AL031577.2-201ENST00000404133 280 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 MIR1266-201ENST00000408125 84 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 NPM1P40-201ENST00000412758 733 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 TIMM9P2-201ENST00000419324 266 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AHCYP8-201ENST00000425108 209 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC008072.1-201ENST00000434254 824 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 RPS25P9-201ENST00000435591 252 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 SDHCP3-201ENST00000445371 506 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 ZNF619P1-201ENST00000446539 752 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 PRDX1P1-201ENST00000449329 596 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AL445991.1-201ENST00000450381 475 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 RN7SL83P-201ENST00000468131 297 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC093878.1-201ENST00000515630 432 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 RNU6-488P-201ENST00000515918 99 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC024909.2-201ENST00000553035 286 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 ACTG1P15-201ENST00000570019 1063 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 RPL7AP69-201ENST00000595306 806 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 VN1R90P-201ENST00000595717 726 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC112220.3-201ENST00000605502 502 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC091946.2-201ENST00000606105 291 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC009163.6-201ENST00000612367 342 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 MAPK10-261ENST00000641050 3109 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 WDR95P-201ENST00000425638 1542 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 AC004023.1-201ENST00000561473 1744 ntBASIC7.61□□□□□ -1.19
TRAIPQ9BWF2 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC083806.2-201ENST00000617795 2685 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC006511.2-201ENST00000388966 660 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AL590762.1-201ENST00000391782 432 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AL355379.1-201ENST00000405542 640 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 RPL6P29-201ENST00000414863 865 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 BOLA3P4-201ENST00000418151 400 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 MTCO3P1-205ENST00000422088 832 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC008753.1-201ENST00000423096 284 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 NPM1P24-201ENST00000428039 894 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 MTND2P40-201ENST00000436718 841 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC092013.1-201ENST00000438795 332 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 KF459542.1-201ENST00000450908 553 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms