Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 OR7E91P-202ENST00000642062 1198 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC003985.2-201ENST00000562268 1669 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.58□□□□□ -1.52
SNX18Q96RF0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SNX18Q96RF0 HSPA8P14-201ENST00000552265 1805 ntBASIC5.58□□□□□ -1.52
SNX18Q96RF0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL078595.2-201ENST00000605309 1780 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL603750.1-201ENST00000624216 1717 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AP001541.1-201ENST00000623322 1904 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 RNU6-252P-201ENST00000363232 107 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 RN7SKP69-201ENST00000365390 305 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 RNU6-207P-201ENST00000384137 107 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 PSMA6P1-201ENST00000400275 741 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL445183.3-201ENST00000414168 502 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 DHFRP2-201ENST00000414224 547 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 NENFP1-201ENST00000419476 466 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL365338.1-201ENST00000422282 858 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 RPS7P2-201ENST00000435134 607 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL353898.1-201ENST00000444055 238 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 NPM1P19-201ENST00000450070 712 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 LRRC37A14P-201ENST00000452297 462 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 RPL12P31-201ENST00000478433 450 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 MTCO3P35-201ENST00000485582 781 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC108103.1-201ENST00000511286 446 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC008055.1-201ENST00000547032 609 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 RN7SL475P-201ENST00000583379 298 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 GAS5-AS1-201ENST00000602767 694 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC073592.6-201ENST00000624271 415 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC073593.1-201ENST00000624500 411 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.57□□□□□ -1.52
SNX18Q96RF0 CASC19-274ENST00000642018 970 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 MTND5P11-201ENST00000511037 1812 ntBASIC5.57□□□□□ -1.52
SNX18Q96RF0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SNX18Q96RF0 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 MRRFP1-201ENST00000435941 1675 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC132825.1-201ENST00000463573 2247 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SNX18Q96RF0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.56□□□□□ -1.52
SNX18Q96RF0 AL158825.1-201ENST00000414735 521 ntBASIC5.56□□□□□ -1.52
SNX18Q96RF0 AC017078.1-201ENST00000416146 368 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms