Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC002519.2-203ENST00000567043 837 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RN7SL52P-201ENST00000584271 284 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RN7SL787P-201ENST00000613000 284 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC037198.3-201ENST00000616754 526 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RN7SL544P-201ENST00000617232 284 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 RN7SL763P-201ENST00000620922 284 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC007603.3-201ENST00000636915 979 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 CASC19-238ENST00000641523 1558 ntBASIC4.04□□□□□ -1.76
AP1S3Q96PC3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
AP1S3Q96PC3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC022306.1-201ENST00000560489 1562 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RNA5SP30-201ENST00000365552 115 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 OR2AH1P-201ENST00000425717 928 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 BX119321.1-201ENST00000428912 797 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RPL7AP49-201ENST00000429522 581 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AL591438.1-201ENST00000433508 581 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RPL19P16-201ENST00000433839 588 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RBMY2AP-201ENST00000445405 1157 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RBMY2CP-201ENST00000448575 1157 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RBMY2DP-202ENST00000448881 1157 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RBMY2BP-202ENST00000451071 1156 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RPL32P33-201ENST00000487023 394 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC073610.1-201ENST00000489971 396 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC073358.1-201ENST00000505671 684 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 DUTP7-201ENST00000507982 486 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC021106.1-201ENST00000509020 1058 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC091912.1-201ENST00000511351 248 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 HMGN2P36-201ENST00000529541 409 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 PRPF19P1-201ENST00000584766 898 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 MIR6793-201ENST00000612376 63 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC100778.3-201ENST00000580060 1750 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AL672167.1-204ENST00000641875 3017 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AC027228.2-201ENST00000567141 2154 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 AL022393.1-201ENST00000625142 1677 ntBASIC4.03□□□□□ -1.76
AP1S3Q96PC3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
AP1S3Q96PC3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 MIPEPP2-201ENST00000422560 1819 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 SCARNA15-201ENST00000607520 4325 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AP1S3Q96PC3 AL050305.1-201ENST00000399993 1230 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 BX284632.2-201ENST00000421091 399 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 AC104333.2-201ENST00000422630 192 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 RPSAP32-201ENST00000432681 526 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 AL512605.1-202ENST00000441919 381 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 AL356121.1-201ENST00000442911 156 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 RPL5P7-201ENST00000444235 813 ntBASIC4.02□□□□□ -1.77
AP1S3Q96PC3 AL359955.2-201ENST00000445380 353 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms