Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC006840.1-201ENST00000623069 542 ntBASIC8.29□□□□□ -1.08
LRCH3Q96II8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 AC011815.3-201ENST00000624194 473 ntBASIC8.29□□□□□ -1.08
LRCH3Q96II8 CLUHP10-201ENST00000631979 980 ntBASIC8.29□□□□□ -1.08
LRCH3Q96II8 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 OR2A3P-202ENST00000641249 1776 ntBASIC8.29□□□□□ -1.08
LRCH3Q96II8 NLRP3-206ENST00000391828 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LRCH3Q96II8 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LRCH3Q96II8 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
LRCH3Q96II8 CASC19-243ENST00000641588 1546 ntBASIC8.29□□□□□ -1.08
LRCH3Q96II8 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.29□□□□□ -1.08
LRCH3Q96II8 AC090983.1-201ENST00000623426 3897 ntBASIC8.29□□□□□ -1.08
LRCH3Q96II8 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC107398.3-201ENST00000562284 7000 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC104118.1-201ENST00000607625 1589 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 FAM205BP-202ENST00000399773 4009 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 RNA5SP435-201ENST00000364044 108 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 Y_RNA.307-201ENST00000365022 117 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 DEFB109C-201ENST00000382575 264 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 DEFB109B-201ENST00000382656 264 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 RNU6-533P-201ENST00000384144 107 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 RPS3AP5-201ENST00000389400 821 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC009302.1-201ENST00000417147 390 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 TIMM8BP2-201ENST00000445940 251 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 LAPTM4BP1-201ENST00000447781 690 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 PPIAP20-201ENST00000449839 135 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 RNU7-157P-201ENST00000459600 66 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 RN7SL74P-201ENST00000464966 299 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 RN7SL152P-201ENST00000484176 298 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 RN7SL518P-201ENST00000491887 280 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 HMGB1P30-201ENST00000492455 606 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 RNU6-835P-201ENST00000516974 104 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 CDC42P3-201ENST00000518493 633 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 BTF3P12-201ENST00000519620 469 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AL161670.1-201ENST00000554348 137 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 MT1L-202ENST00000566367 78 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 NRBF2P1-201ENST00000587407 859 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 COX6CP16-201ENST00000603667 216 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC113361.1-201ENST00000606683 543 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC103710.4-201ENST00000609301 899 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 uc_338.37-201ENST00000620113 186 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 AC012629.3-201ENST00000623397 328 ntBASIC8.28□□□□□ -1.08
LRCH3Q96II8 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
LRCH3Q96II8 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LRCH3Q96II8 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms