Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC016745.2-201ENST00000608834 3443 ntBASIC8.65□□□□□ -1.02
TOPBP1Q92547 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.65□□□□□ -1.02
TOPBP1Q92547 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TOPBP1Q92547 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC8.65□□□□□ -1.03
TOPBP1Q92547 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TOPBP1Q92547 SPATA31C1-201ENST00000420021 3895 ntBASIC8.65□□□□□ -1.03
TOPBP1Q92547 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TOPBP1Q92547 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
TOPBP1Q92547 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
TOPBP1Q92547 SNORA70F-201ENST00000384142 135 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 AC010350.1-201ENST00000504908 231 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 AC093824.1-201ENST00000508796 343 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 OR5M2P-201ENST00000529003 936 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 DERA-209ENST00000532964 854 ntTSL 5 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 AC020910.3-201ENST00000603701 874 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 AP001521.2-201ENST00000608772 546 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 AL449283.1-201ENST00000602631 3403 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 RSU1P3-201ENST00000412878 835 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 AC239367.2-201ENST00000447309 705 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 SNORA70.11-201ENST00000515987 138 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 SNORA70.13-201ENST00000516116 138 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 RNA5SP392-201ENST00000516905 112 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 AP001880.2-201ENST00000538233 448 ntBASIC8.64□□□□□ -1.03
TOPBP1Q92547 SSX9-202ENST00000608568 580 ntTSL 4 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.64□□□□□ -1.03
TOPBP1Q92547 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TOPBP1Q92547 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOPBP1Q92547 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.63□□□□□ -1.03
TOPBP1Q92547 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.63□□□□□ -1.03
TOPBP1Q92547 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
TOPBP1Q92547 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TOPBP1Q92547 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.63□□□□□ -1.03
TOPBP1Q92547 MIR1193-201ENST00000408109 78 ntBASIC8.63□□□□□ -1.03
TOPBP1Q92547 AL354868.1-201ENST00000417077 482 ntBASIC8.63□□□□□ -1.03
TOPBP1Q92547 AC124944.2-201ENST00000429866 1242 ntBASIC8.63□□□□□ -1.03
TOPBP1Q92547 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC8.63□□□□□ -1.03
TOPBP1Q92547 AC023818.1-201ENST00000498379 384 ntBASIC8.63□□□□□ -1.03
TOPBP1Q92547 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC8.63□□□□□ -1.03
TOPBP1Q92547 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC8.63□□□□□ -1.03
TOPBP1Q92547 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOPBP1Q92547 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOPBP1Q92547 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TOPBP1Q92547 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TOPBP1Q92547 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOPBP1Q92547 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOPBP1Q92547 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOPBP1Q92547 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 RPL23AP17-201ENST00000401064 499 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 SNORA77-201ENST00000408716 125 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 RPL17P36-201ENST00000420302 549 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 RN7SL817P-201ENST00000480777 288 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 NIP7P2-201ENST00000485801 544 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 AL121873.1-201ENST00000616013 524 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 FTO-223ENST00000640179 210 ntTSL 5 BASIC8.62□□□□□ -1.03
TOPBP1Q92547 LCOR-201ENST00000286067 4542 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TOPBP1Q92547 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TOPBP1Q92547 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TOPBP1Q92547 HYDIN2-203ENST00000614586 13885 ntBASIC8.62□□□□□ -1.03
TOPBP1Q92547 AC063976.2-201ENST00000425667 3556 ntBASIC8.61□□□□□ -1.03
TOPBP1Q92547 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TOPBP1Q92547 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 MIR129-1-201ENST00000384972 72 ntBASIC8.61□□□□□ -1.03
TOPBP1Q92547 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TOPBP1Q92547 RPL12P43-201ENST00000420608 499 ntBASIC8.61□□□□□ -1.03
TOPBP1Q92547 RPL23AP1-201ENST00000428990 471 ntBASIC8.61□□□□□ -1.03
TOPBP1Q92547 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC8.61□□□□□ -1.03
TOPBP1Q92547 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms