Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 AC011626.1-201ENST00000604710 562 ntBASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 AC083809.1-201ENST00000615051 472 ntBASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
CDC42BPAQ5VT25 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 PRELID3BP5-201ENST00000508612 460 ntBASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 IGKV1-32-201ENST00000519290 311 ntBASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 NMNAT1P1-201ENST00000554095 876 ntBASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 BGLT3-201ENST00000564523 994 ntBASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 AC073869.10-201ENST00000642016 354 ntBASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.79□□□□□ -1.16
CDC42BPAQ5VT25 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 OR8V1P-201ENST00000395193 873 ntBASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 AC119751.6-201ENST00000416712 186 ntBASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 TXNP5-201ENST00000441043 315 ntBASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 RPS24P16-201ENST00000497294 392 ntBASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 MAPK10-270ENST00000641102 3538 ntBASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 AC079414.3-201ENST00000612986 1090 ntBASIC7.78□□□□□ -1.16
CDC42BPAQ5VT25 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.77□□□□□ -1.16
CDC42BPAQ5VT25 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 SNORA11-201ENST00000408789 128 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 RPL7AP61-201ENST00000443410 636 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 AC000111.2-201ENST00000448200 210 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 TCEA1P1-201ENST00000449716 880 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 CYCSP42-201ENST00000450823 238 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 AC079298.1-201ENST00000625026 1619 ntBASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CDC42BPAQ5VT25 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CDC42BPAQ5VT25 RNA5SP191-201ENST00000362585 102 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms