Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 USP9YP19-201ENST00000412165 485 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 CRIP1P1-201ENST00000427567 185 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 CYCSP6-201ENST00000434498 302 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 OR6D1P-201ENST00000436165 939 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 RPS4XP1-201ENST00000482189 787 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 RPS21P4-201ENST00000487122 248 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 IGLV3-24-201ENST00000517477 197 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC008536.1-201ENST00000602872 669 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC008833.1-201ENST00000611633 691 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC025574.2-201ENST00000615621 514 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC104307.1-201ENST00000616142 196 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC037198.3-201ENST00000616754 526 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 MIR6730-201ENST00000622213 67 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC073592.7-201ENST00000623659 507 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC020923.1-201ENST00000624021 917 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 AC079776.5-201ENST00000641920 211 ntBASIC5.97□□□□□ -1.45
USP41Q3LFD5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USP41Q3LFD5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USP41Q3LFD5 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USP41Q3LFD5 ADAM24P-201ENST00000398655 2101 ntBASIC5.96□□□□□ -1.45
USP41Q3LFD5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 RNU1-77P-201ENST00000390868 162 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 AC096644.3-201ENST00000416788 338 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 AL139148.1-201ENST00000427122 680 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 MTATP6P11-201ENST00000428071 670 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 CNOT7P2-201ENST00000441051 832 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 RPL32P9-201ENST00000487963 407 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 AC000068.2-201ENST00000608816 460 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 WBP1LP8-201ENST00000617401 327 ntBASIC5.96□□□□□ -1.46
USP41Q3LFD5 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
USP41Q3LFD5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USP41Q3LFD5 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 MRRFP1-201ENST00000435941 1675 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 MIR7-1-201ENST00000384871 110 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AL133325.1-201ENST00000421090 382 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC007394.1-201ENST00000421941 531 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 SETP9-201ENST00000423837 832 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AJ239321.1-201ENST00000424255 564 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 RPS3AP38-201ENST00000435889 763 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 GAPDHP58-201ENST00000438477 1006 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 PTMAP6-201ENST00000439110 327 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 RPL31P53-201ENST00000457065 348 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC025181.1-201ENST00000477507 416 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC079841.1-201ENST00000481228 950 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 NPM1P28-201ENST00000492269 840 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 PGAM1P13-201ENST00000507497 754 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 ST13P12-201ENST00000508958 1094 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 snoU109.5-201ENST00000516231 132 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms