Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HNF4AP41235 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 HMGN1P20-201ENST00000411849 300 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 RFESDP1-201ENST00000422350 461 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AKR1B10P1-201ENST00000425765 942 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.52□□□□□ -1.53
HNF4AP41235 MTND2P2-201ENST00000434633 945 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AC097523.2-201ENST00000435551 652 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.52□□□□□ -1.53
HNF4AP41235 SNORD125-201ENST00000459538 96 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AC007688.1-201ENST00000475592 759 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 MTND3P6-201ENST00000485242 339 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.52□□□□□ -1.53
HNF4AP41235 IGHV3-63-201ENST00000518422 341 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.52□□□□□ -1.53
HNF4AP41235 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.52□□□□□ -1.53
HNF4AP41235 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.52□□□□□ -1.53
HNF4AP41235 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.52□□□□□ -1.53
HNF4AP41235 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.52□□□□□ -1.53
HNF4AP41235 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.52□□□□□ -1.53
HNF4AP41235 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
HNF4AP41235 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.52□□□□□ -1.53
HNF4AP41235 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.52□□□□□ -1.53
HNF4AP41235 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.52□□□□□ -1.53
HNF4AP41235 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HNF4AP41235 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HNF4AP41235 HMGB1P51-201ENST00000605166 638 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AC108865.2-201ENST00000606881 432 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AL022394.1-201ENST00000606979 292 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AC020658.4-201ENST00000613987 684 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HNF4AP41235 AC005618.4-201ENST00000625053 554 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 MIR1910-201ENST00000636955 80 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.52□□□□□ -1.53
HNF4AP41235 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HNF4AP41235 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HNF4AP41235 AC144833.1-201ENST00000567953 4089 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HNF4AP41235 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
HNF4AP41235 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.52□□□□□ -1.53
HNF4AP41235 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
HNF4AP41235 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.52□□□□□ -1.53
HNF4AP41235 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HNF4AP41235 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.52□□□□□ -1.53
HNF4AP41235 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.52□□□□□ -1.53
HNF4AP41235 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HNF4AP41235 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 RNU1-150P-201ENST00000362491 162 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 RNA5SP510-201ENST00000364697 99 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 RNU1-74P-201ENST00000384108 171 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AL607077.1-201ENST00000401718 499 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 MIR1282-201ENST00000408865 101 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 RPS27AP6-201ENST00000427962 448 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.51□□□□□ -1.53
HNF4AP41235 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.51□□□□□ -1.53
HNF4AP41235 GAPDHP48-201ENST00000436626 961 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AL512637.1-201ENST00000439523 1231 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 SCAND3P1-201ENST00000439854 1060 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 TXNP2-201ENST00000443918 295 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.51□□□□□ -1.53
HNF4AP41235 UBFD1P1-201ENST00000473259 814 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
HNF4AP41235 RPL32P33-201ENST00000487023 394 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 DUTP1-201ENST00000493631 470 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.51□□□□□ -1.53
HNF4AP41235 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.51□□□□□ -1.53
HNF4AP41235 AC111000.6-201ENST00000514471 709 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 snoU109.6-201ENST00000516831 118 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 SCARNA6.1-201ENST00000516989 238 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.51□□□□□ -1.53
HNF4AP41235 NANOGNBP2-201ENST00000544753 553 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC137627.1-201ENST00000545761 289 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC139697.1-201ENST00000548429 745 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC090888.3-201ENST00000558917 509 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC009268.1-201ENST00000561352 1203 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AGGF1P7-201ENST00000562369 913 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
HNF4AP41235 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.51□□□□□ -1.53
HNF4AP41235 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.51□□□□□ -1.53
HNF4AP41235 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.51□□□□□ -1.53
HNF4AP41235 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.51□□□□□ -1.53
HNF4AP41235 AL137072.1-201ENST00000603444 466 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HNF4AP41235 AP005431.1-201ENST00000618479 319 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AC022919.1-201ENST00000624979 626 ntBASIC5.51□□□□□ -1.53
HNF4AP41235 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.51□□□□□ -1.53
HNF4AP41235 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms