Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 HMGB3P6-201ENST00000444896 598 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AC099063.2-201ENST00000446360 662 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 NACAP5-201ENST00000509863 636 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AC074087.1-201ENST00000512059 724 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AC093816.1-201ENST00000515076 913 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 RNU6-311P-201ENST00000516224 102 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 RNU6-347P-201ENST00000516658 105 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 snoZ278.1-201ENST00000517059 112 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AC008562.1-201ENST00000521763 330 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF4P23510 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF4P23510 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.51□□□□□ -1.53
TNFSF4P23510 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.51□□□□□ -1.53
TNFSF4P23510 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 ARGFXP2-201ENST00000579304 949 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 BNIP3P32-201ENST00000600015 554 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 NTAN1P1-201ENST00000603150 646 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 PSMA6P4-201ENST00000603247 718 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AL450336.1-201ENST00000605180 586 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF4P23510 AC010975.3-201ENST00000618727 978 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 VN1R7P-201ENST00000619242 903 ntBASIC5.51□□□□□ -1.53
TNFSF4P23510 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF4P23510 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF4P23510 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF4P23510 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
TNFSF4P23510 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF4P23510 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TNFSF4P23510 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TNFSF4P23510 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF4P23510 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFSF4P23510 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF4P23510 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF4P23510 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 AC138393.1-206ENST00000540997 1886 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFSF4P23510 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TNFSF4P23510 SAGE3P-201ENST00000619800 1635 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TNFSF4P23510 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TNFSF4P23510 SNORD16-201ENST00000362803 99 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 PSMA6P1-201ENST00000400275 741 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 AL133260.1-201ENST00000405720 405 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 GAPDHP49-201ENST00000421421 961 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 DYNLL1P7-201ENST00000429273 258 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF4P23510 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF4P23510 RPL21P110-201ENST00000433345 446 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC234064.1-201ENST00000436312 247 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 PMS2P9-201ENST00000441237 515 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 ZNF886P-201ENST00000450781 723 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF4P23510 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC069528.1-202ENST00000482888 637 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC022415.1-202ENST00000486612 523 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC134050.1-201ENST00000495088 933 ntBASIC5.5□□□□□ -1.53
TNFSF4P23510 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFSF4P23510 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFSF4P23510 IGJP1-201ENST00000522682 475 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms