Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL122020.1-201ENST00000472287 459 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 MTCYBP16-201ENST00000509187 1129 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC7.61□□□□□ -1.19
LMNB1P20700 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.61□□□□□ -1.19
LMNB1P20700 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC7.61□□□□□ -1.19
LMNB1P20700 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC7.61□□□□□ -1.19
LMNB1P20700 NBR2-204ENST00000587322 63 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC7.61□□□□□ -1.19
LMNB1P20700 FO393422.1-201ENST00000603908 708 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 AC079395.2-201ENST00000610982 737 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 AC068792.1-201ENST00000621354 417 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.61□□□□□ -1.19
LMNB1P20700 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 AC034229.6-201ENST00000623704 224 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 AL161901.1-201ENST00000624954 3425 ntBASIC7.61□□□□□ -1.19
LMNB1P20700 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
LMNB1P20700 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.61□□□□□ -1.19
LMNB1P20700 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.61□□□□□ -1.19
LMNB1P20700 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.61□□□□□ -1.19
LMNB1P20700 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
LMNB1P20700 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.6□□□□□ -1.19
LMNB1P20700 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.6□□□□□ -1.19
LMNB1P20700 AL133243.4-201ENST00000623116 3109 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMNB1P20700 RN7SKP149-201ENST00000363008 344 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 RNU1-49P-201ENST00000363468 159 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 AC002504.1-201ENST00000438281 691 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 AL589880.1-201ENST00000448271 287 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.6□□□□□ -1.19
LMNB1P20700 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
LMNB1P20700 AC117395.1-201ENST00000487390 403 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC7.6□□□□□ -1.19
LMNB1P20700 AC034244.1-201ENST00000507687 207 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 DUTP7-201ENST00000507982 486 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.6□□□□□ -1.19
LMNB1P20700 EIF4A2P5-201ENST00000529914 499 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.6□□□□□ -1.19
LMNB1P20700 AP001858.2-201ENST00000536213 601 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AC087897.1-201ENST00000550134 156 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 MIR4789-201ENST00000577469 82 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 MIR1269B-201ENST00000580405 75 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 AC020765.1-201ENST00000604296 328 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AP004372.1-201ENST00000604842 844 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AC018638.7-201ENST00000605836 1114 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AL591167.1-201ENST00000607321 456 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 AC123767.1-202ENST00000620407 817 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.6□□□□□ -1.19
LMNB1P20700 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
LMNB1P20700 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.6□□□□□ -1.19
LMNB1P20700 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
LMNB1P20700 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 AC104454.1-201ENST00000421341 1401 ntBASIC7.6□□□□□ -1.19
LMNB1P20700 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.6□□□□□ -1.19
LMNB1P20700 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
LMNB1P20700 AC022819.1-201ENST00000563495 3910 ntBASIC7.59□□□□□ -1.19
LMNB1P20700 MAPK10-323ENST00000641493 3207 ntBASIC7.59□□□□□ -1.19
LMNB1P20700 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
LMNB1P20700 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.59□□□□□ -1.19
LMNB1P20700 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMNB1P20700 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
LMNB1P20700 AC235565.1-201ENST00000456962 1325 ntBASIC7.59□□□□□ -1.19
LMNB1P20700 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms