Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
ERCC3P19447 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
ERCC3P19447 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
ERCC3P19447 RNA5SP122-201ENST00000384457 108 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 MIR323B-201ENST00000385269 82 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
ERCC3P19447 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.6□□□□□ -1.19
ERCC3P19447 RN7SKP296-201ENST00000411185 341 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
ERCC3P19447 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 FAM96AP1-201ENST00000430879 482 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.6□□□□□ -1.19
ERCC3P19447 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 CYCSP11-201ENST00000436426 315 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.6□□□□□ -1.19
ERCC3P19447 CUBNP2-201ENST00000443534 1139 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.6□□□□□ -1.19
ERCC3P19447 AC234781.3-201ENST00000452540 973 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.6□□□□□ -1.19
ERCC3P19447 SULT1D1P-201ENST00000458020 882 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.6□□□□□ -1.19
ERCC3P19447 AC126121.1-201ENST00000482313 553 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC7.6□□□□□ -1.19
ERCC3P19447 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC7.6□□□□□ -1.19
ERCC3P19447 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.6□□□□□ -1.19
ERCC3P19447 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.6□□□□□ -1.19
ERCC3P19447 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 AP003115.1-201ENST00000569849 463 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC022069.1-201ENST00000582910 658 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 AC026898.1-201ENST00000586404 571 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.6□□□□□ -1.19
ERCC3P19447 AL031281.1-201ENST00000604049 488 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC004890.3-201ENST00000605566 1095 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AL021368.3-201ENST00000607119 578 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 AL592148.2-201ENST00000612210 372 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC090246.1-201ENST00000616499 426 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC7.6□□□□□ -1.19
ERCC3P19447 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.6□□□□□ -1.19
ERCC3P19447 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.6□□□□□ -1.19
ERCC3P19447 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.6□□□□□ -1.19
ERCC3P19447 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
ERCC3P19447 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.6□□□□□ -1.19
ERCC3P19447 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 AL359091.1-201ENST00000449048 1734 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
ERCC3P19447 SNORD113-6-201ENST00000363345 75 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 RNU4-72P-201ENST00000410754 173 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.59□□□□□ -1.19
ERCC3P19447 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.59□□□□□ -1.19
ERCC3P19447 GTF2IP23-201ENST00000423746 351 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 AC083862.1-201ENST00000427378 1242 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC7.59□□□□□ -1.19
ERCC3P19447 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 EIF5AP4-201ENST00000441206 465 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 UBE2D3P4-201ENST00000441973 436 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 Z83838.1-202ENST00000456225 839 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 RNU7-125P-201ENST00000458760 62 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
ERCC3P19447 AC096741.1-201ENST00000472250 846 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 RNU6-1129P-201ENST00000515964 104 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 SNORA81.2-201ENST00000516868 170 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 HMGB1P23-201ENST00000518743 568 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.59□□□□□ -1.19
ERCC3P19447 IGKV2D-10-201ENST00000520194 281 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 ELOCP32-201ENST00000548625 324 ntBASIC7.59□□□□□ -1.19
ERCC3P19447 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
ERCC3P19447 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC7.59□□□□□ -1.19
ERCC3P19447 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.59□□□□□ -1.19
ERCC3P19447 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC7.59□□□□□ -1.19
ERCC3P19447 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms