Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AP000769.2-201ENST00000602344 396 ntBASIC4.57□□□□□ -1.68
CD74P04233 AC108673.3-201ENST00000609183 335 ntBASIC4.57□□□□□ -1.68
CD74P04233 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.57□□□□□ -1.68
CD74P04233 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.57□□□□□ -1.68
CD74P04233 MIR6793-201ENST00000612376 63 ntBASIC4.57□□□□□ -1.68
CD74P04233 AC109583.2-201ENST00000617367 129 ntBASIC4.57□□□□□ -1.68
CD74P04233 AC245014.3-201ENST00000618589 347 ntBASIC4.57□□□□□ -1.68
CD74P04233 BX005214.3-202ENST00000619809 325 ntBASIC4.57□□□□□ -1.68
CD74P04233 AC010809.3-201ENST00000621310 641 ntBASIC4.57□□□□□ -1.68
CD74P04233 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.57□□□□□ -1.68
CD74P04233 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CD74P04233 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD74P04233 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CD74P04233 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD74P04233 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
CD74P04233 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.57□□□□□ -1.68
CD74P04233 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD74P04233 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD74P04233 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD74P04233 LINC01963-201ENST00000562038 3148 ntBASIC4.57□□□□□ -1.68
CD74P04233 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CD74P04233 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD74P04233 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD74P04233 AC093775.1-201ENST00000624154 1868 ntBASIC4.56□□□□□ -1.68
CD74P04233 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CD74P04233 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 AL354854.1-201ENST00000455940 1363 ntBASIC4.56□□□□□ -1.68
CD74P04233 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD74P04233 AC083843.2-201ENST00000568248 6253 ntBASIC4.56□□□□□ -1.68
CD74P04233 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD74P04233 RNFT1P3-201ENST00000340898 1052 ntBASIC4.56□□□□□ -1.68
CD74P04233 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD74P04233 SNORA64.1-201ENST00000362600 132 ntBASIC4.56□□□□□ -1.68
CD74P04233 SNORA51.9-201ENST00000384295 124 ntBASIC4.56□□□□□ -1.68
CD74P04233 MIR130B-202ENST00000385018 82 ntBASIC4.56□□□□□ -1.68
CD74P04233 RN7SKP16-201ENST00000410180 299 ntBASIC4.56□□□□□ -1.68
CD74P04233 AC013268.2-201ENST00000420753 337 ntBASIC4.56□□□□□ -1.68
CD74P04233 AC126120.1-201ENST00000431082 470 ntBASIC4.56□□□□□ -1.68
CD74P04233 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.56□□□□□ -1.68
CD74P04233 RPSAP41-201ENST00000439695 860 ntBASIC4.56□□□□□ -1.68
CD74P04233 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.56□□□□□ -1.68
CD74P04233 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.56□□□□□ -1.68
CD74P04233 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.56□□□□□ -1.68
CD74P04233 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 RN7SL814P-201ENST00000487715 300 ntBASIC4.56□□□□□ -1.68
CD74P04233 PFN1P8-201ENST00000497012 543 ntBASIC4.56□□□□□ -1.68
CD74P04233 NIFKP7-201ENST00000503365 834 ntBASIC4.56□□□□□ -1.68
CD74P04233 AC091874.2-201ENST00000505889 720 ntBASIC4.56□□□□□ -1.68
CD74P04233 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.56□□□□□ -1.68
CD74P04233 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.56□□□□□ -1.68
CD74P04233 OR10D4P-201ENST00000525892 951 ntBASIC4.56□□□□□ -1.68
CD74P04233 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.56□□□□□ -1.68
CD74P04233 AC233702.9-201ENST00000581528 203 ntBASIC4.56□□□□□ -1.68
CD74P04233 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CD74P04233 AL499605.1-201ENST00000604628 403 ntBASIC4.56□□□□□ -1.68
CD74P04233 AP003400.3-201ENST00000624904 346 ntBASIC4.56□□□□□ -1.68
CD74P04233 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 MTND5P23-201ENST00000430812 1655 ntBASIC4.56□□□□□ -1.68
CD74P04233 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD74P04233 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CD74P04233 AL672167.1-204ENST00000641875 3017 ntBASIC4.56□□□□□ -1.68
CD74P04233 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CD74P04233 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CD74P04233 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 STX3-208ENST00000641815 3236 ntBASIC4.55□□□□□ -1.68
CD74P04233 AC008079.2-201ENST00000623543 20396 ntBASIC4.55□□□□□ -1.68
CD74P04233 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 OR55B1P-203ENST00000641518 2602 ntBASIC4.55□□□□□ -1.68
CD74P04233 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.55□□□□□ -1.68
CD74P04233 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 AK4P4-201ENST00000419465 646 ntBASIC4.55□□□□□ -1.68
CD74P04233 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.55□□□□□ -1.68
CD74P04233 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 AC114982.2-201ENST00000461396 358 ntBASIC4.55□□□□□ -1.68
CD74P04233 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 AC104339.1-201ENST00000465478 348 ntBASIC4.55□□□□□ -1.68
CD74P04233 CBX1P5-201ENST00000475330 559 ntBASIC4.55□□□□□ -1.68
CD74P04233 AC022133.1-201ENST00000490961 571 ntBASIC4.55□□□□□ -1.68
CD74P04233 RN7SL346P-201ENST00000491561 294 ntBASIC4.55□□□□□ -1.68
CD74P04233 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 AC018797.1-201ENST00000510791 255 ntBASIC4.55□□□□□ -1.68
CD74P04233 AC109464.1-201ENST00000511091 819 ntBASIC4.55□□□□□ -1.68
CD74P04233 RFPL4AP5-201ENST00000514977 504 ntBASIC4.55□□□□□ -1.68
CD74P04233 AP003396.4-201ENST00000527574 265 ntBASIC4.55□□□□□ -1.68
CD74P04233 TOMM20P1-201ENST00000534518 427 ntBASIC4.55□□□□□ -1.68
CD74P04233 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms