Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.92□□□□□ -1.46
UBE4BO95155 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE4BO95155 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE4BO95155 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.92□□□□□ -1.46
UBE4BO95155 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE4BO95155 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE4BO95155 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 RNA5SP335-201ENST00000363817 110 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC079355.1-201ENST00000421770 223 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 HSPD1P12-201ENST00000429127 1069 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 AL136231.1-201ENST00000429407 730 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 AC090804.1-201ENST00000448870 490 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 CBX1P2-201ENST00000453841 458 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 RPL35AP19-201ENST00000469425 329 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC021193.1-201ENST00000511607 420 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 AC022360.1-201ENST00000521058 340 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 AP004607.2-201ENST00000533949 322 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE4BO95155 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.92□□□□□ -1.46
UBE4BO95155 AC009027.1-201ENST00000604510 479 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 AC004477.3-201ENST00000614061 590 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 AP000550.3-201ENST00000637734 379 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 AL049767.1-202ENST00000637826 242 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
UBE4BO95155 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.92□□□□□ -1.46
UBE4BO95155 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
UBE4BO95155 AC003973.3-201ENST00000624863 2822 ntBASIC5.92□□□□□ -1.46
UBE4BO95155 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
UBE4BO95155 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.91□□□□□ -1.46
UBE4BO95155 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
UBE4BO95155 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
UBE4BO95155 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.91□□□□□ -1.46
UBE4BO95155 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
UBE4BO95155 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 DSTNP5-201ENST00000427921 523 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.91□□□□□ -1.46
UBE4BO95155 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.91□□□□□ -1.46
UBE4BO95155 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 CYCSP51-201ENST00000443545 318 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 AC090602.1-201ENST00000469695 252 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 CBX1P5-201ENST00000475330 559 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 RPS12P31-201ENST00000491419 398 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.91□□□□□ -1.46
UBE4BO95155 IMPA1P1-201ENST00000510718 842 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 HMGB1P40-201ENST00000525121 540 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.91□□□□□ -1.46
UBE4BO95155 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.91□□□□□ -1.46
UBE4BO95155 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.91□□□□□ -1.46
UBE4BO95155 RN7SL290P-201ENST00000578661 300 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 AL589674.2-201ENST00000604304 337 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 FAM72A-208ENST00000607379 1139 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 AL354950.1-201ENST00000614150 568 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 WBP1LP8-201ENST00000617401 327 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.91□□□□□ -1.46
UBE4BO95155 AC099654.6-201ENST00000636487 512 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.91□□□□□ -1.46
UBE4BO95155 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
UBE4BO95155 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
UBE4BO95155 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
UBE4BO95155 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
UBE4BO95155 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.9□□□□□ -1.46
UBE4BO95155 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
UBE4BO95155 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.9□□□□□ -1.46
UBE4BO95155 AC093671.1-201ENST00000624981 2929 ntBASIC5.9□□□□□ -1.46
UBE4BO95155 AL078621.3-201ENST00000623707 2042 ntBASIC5.9□□□□□ -1.46
UBE4BO95155 AL034549.2-201ENST00000618285 3373 ntBASIC5.9□□□□□ -1.46
UBE4BO95155 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
UBE4BO95155 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
UBE4BO95155 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.9□□□□□ -1.47
UBE4BO95155 OR9G4-201ENST00000302957 984 ntBASIC5.9□□□□□ -1.47
UBE4BO95155 MTHFD2P5-201ENST00000320415 844 ntBASIC5.9□□□□□ -1.47
UBE4BO95155 RN7SKP186-201ENST00000365371 303 ntBASIC5.9□□□□□ -1.47
UBE4BO95155 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms