Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM1O00151 BRAFP1-201ENST00000445336 2703 ntBASIC5.31□□□□□ -1.56
PDLIM1O00151 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.31□□□□□ -1.56
PDLIM1O00151 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PDLIM1O00151 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM1O00151 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM1O00151 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM1O00151 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM1O00151 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 UGT2B26P-201ENST00000508672 1613 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 SMG1P4-204ENST00000523028 4131 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM1O00151 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.3□□□□□ -1.56
PDLIM1O00151 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 AC092681.1-201ENST00000297369 291 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AC017079.1-201ENST00000333650 415 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 RNA5SP241-201ENST00000391326 114 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AC233289.1-201ENST00000403700 508 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM1O00151 PRUNEP1-201ENST00000425846 705 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 VN1R110P-201ENST00000438988 971 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 DNAJA1P5-201ENST00000440278 943 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AL591363.1-201ENST00000450091 483 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 GEMIN2P1-201ENST00000454246 752 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 RN7SL269P-201ENST00000467795 305 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM1O00151 SCARNA18.1-201ENST00000516330 83 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 TRIM77BP-201ENST00000524985 1119 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AP003396.4-201ENST00000527574 265 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AC079064.1-201ENST00000528365 362 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM1O00151 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM1O00151 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.3□□□□□ -1.56
PDLIM1O00151 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.3□□□□□ -1.56
PDLIM1O00151 AC011270.1-201ENST00000558606 583 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 AC234775.3-201ENST00000564612 656 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 MTCYBP13-201ENST00000578634 1093 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 RN7SL290P-201ENST00000578661 300 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 AL136131.3-201ENST00000607600 188 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM1O00151 AP003400.2-201ENST00000624036 666 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
PDLIM1O00151 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PDLIM1O00151 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM1O00151 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.3□□□□□ -1.56
PDLIM1O00151 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PDLIM1O00151 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 NAMPTP1-201ENST00000440465 2514 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.3□□□□□ -1.56
PDLIM1O00151 OR51C1P-202ENST00000641159 1444 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 OR4F13P-202ENST00000560066 2054 ntBASIC5.3□□□□□ -1.56
PDLIM1O00151 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM1O00151 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
PDLIM1O00151 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PDLIM1O00151 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AC117409.1-201ENST00000470499 1310 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
PDLIM1O00151 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDLIM1O00151 RNA5SP273-201ENST00000362484 113 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AC007618.1-201ENST00000366455 732 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDLIM1O00151 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDLIM1O00151 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 Z68694.1-201ENST00000413929 841 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.29□□□□□ -1.56
PDLIM1O00151 TRGV7-201ENST00000427089 353 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 PCNPP2-201ENST00000441651 455 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 OR7E116P-201ENST00000448529 957 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 AC023245.1-201ENST00000468501 517 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 UBFD1P1-201ENST00000473259 814 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AC117394.1-201ENST00000477323 567 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM1O00151 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AL133372.1-201ENST00000493565 745 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AC021193.1-201ENST00000511607 420 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AC122688.1-201ENST00000541494 223 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 NANOGNBP2-201ENST00000544753 553 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms