Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.58□□□□□ -1.68
SRRM4A7MD48 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SRRM4A7MD48 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRRM4A7MD48 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRRM4A7MD48 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRRM4A7MD48 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRRM4A7MD48 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRRM4A7MD48 AC097063.1-201ENST00000426714 1797 ntBASIC4.58□□□□□ -1.68
SRRM4A7MD48 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.58□□□□□ -1.68
SRRM4A7MD48 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRRM4A7MD48 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 IFIT1P1-201ENST00000400497 1449 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 CAP1P2-201ENST00000417455 1409 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 SSXP3-201ENST00000442971 1300 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 RNU4-31P-201ENST00000384211 141 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 RNU6-40P-201ENST00000384254 107 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 RNU6-31P-201ENST00000384388 108 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 MIR1203-201ENST00000408812 85 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 RPS27AP6-201ENST00000427962 448 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC069154.1-201ENST00000432914 542 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC138761.5-201ENST00000433967 325 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC090602.1-201ENST00000469695 252 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 RN7SL570P-201ENST00000484405 292 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 MTND3P24-201ENST00000506306 329 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 GLUD1P3-202ENST00000508551 200 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC114781.3-201ENST00000512083 142 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC233266.2-201ENST00000567067 528 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 AC005618.4-201ENST00000625053 554 ntBASIC4.57□□□□□ -1.68
SRRM4A7MD48 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRRM4A7MD48 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SRRM4A7MD48 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 RBPJP2-201ENST00000618187 1444 ntBASIC4.56□□□□□ -1.68
SRRM4A7MD48 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SRRM4A7MD48 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SRRM4A7MD48 AC026523.2-201ENST00000625039 7739 ntBASIC4.56□□□□□ -1.68
SRRM4A7MD48 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.56□□□□□ -1.68
SRRM4A7MD48 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SRRM4A7MD48 AL121886.1-201ENST00000358609 435 ntBASIC4.56□□□□□ -1.68
SRRM4A7MD48 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms