Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.9□□□□□ -1.63
COPS3Q9UNS2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
COPS3Q9UNS2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.9□□□□□ -1.63
COPS3Q9UNS2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
COPS3Q9UNS2 MAPK10-349ENST00000641767 3661 ntBASIC4.9□□□□□ -1.63
COPS3Q9UNS2 DDX18P6-201ENST00000450119 1997 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 SMG1P4-204ENST00000523028 4131 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 Z83820.1-201ENST00000456978 1499 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 MIR1203-201ENST00000408812 85 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 MTND4LP21-201ENST00000415303 295 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 RPL34P6-201ENST00000432390 345 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 HMGB3P24-201ENST00000433260 622 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC007679.3-201ENST00000434035 414 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 OR52Y1P-201ENST00000452418 828 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC022215.1-201ENST00000481770 362 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 RPS3AP15-201ENST00000483874 781 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 LSM3P4-201ENST00000502948 309 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 IGBP1P4-201ENST00000503202 879 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 RN7SKP183-201ENST00000517169 324 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC092709.1-201ENST00000521355 1045 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC068305.2-201ENST00000550567 1205 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 H3F3BP2-201ENST00000583907 357 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AL359091.2-201ENST00000609303 556 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC025574.2-201ENST00000615621 514 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AC026367.3-201ENST00000619032 590 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 AP001962.1-201ENST00000624114 559 ntBASIC4.89□□□□□ -1.63
COPS3Q9UNS2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
COPS3Q9UNS2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 RN7SKP28-201ENST00000364770 305 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 NENFP3-201ENST00000503735 313 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 OR11H3P-201ENST00000554547 982 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC106730.2-201ENST00000566641 540 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC015802.2-201ENST00000589690 189 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AP000769.2-201ENST00000602344 396 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC135068.5-201ENST00000624197 983 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC073592.6-201ENST00000624271 415 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.88□□□□□ -1.63
COPS3Q9UNS2 RBPJP2-201ENST00000618187 1444 ntBASIC4.88□□□□□ -1.63
COPS3Q9UNS2 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms