Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC119751.6-201ENST00000416712 186 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 KNOP1P3-201ENST00000446933 426 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 RN7SL354P-201ENST00000469282 294 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AC008147.3-201ENST00000548666 354 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 MEMO1P5-201ENST00000604810 406 ntBASIC8.03□□□□□ -1.12
SCAPERQ9BY12 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 NAA60-237ENST00000615865 326 ntTSL 5 BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
SCAPERQ9BY12 AC092070.2-203ENST00000598377 3644 ntBASIC8.02□□□□□ -1.12
SCAPERQ9BY12 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
SCAPERQ9BY12 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 AC022164.1-201ENST00000568767 2673 ntBASIC8.02□□□□□ -1.13
SCAPERQ9BY12 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 AC005725.1-201ENST00000577346 2607 ntBASIC8.02□□□□□ -1.13
SCAPERQ9BY12 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 HSPD1P12-201ENST00000429127 1069 ntBASIC8.02□□□□□ -1.13
SCAPERQ9BY12 PRPF38AP2-201ENST00000438179 851 ntBASIC8.02□□□□□ -1.13
SCAPERQ9BY12 RPL36AP15-201ENST00000444514 266 ntBASIC8.02□□□□□ -1.13
SCAPERQ9BY12 HMGN2P25-201ENST00000486956 268 ntBASIC8.02□□□□□ -1.13
SCAPERQ9BY12 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 AC087360.1-201ENST00000518788 616 ntBASIC8.02□□□□□ -1.13
SCAPERQ9BY12 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.02□□□□□ -1.13
SCAPERQ9BY12 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AC011933.2-201ENST00000578539 2790 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AC083899.1-201ENST00000454465 3819 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 H3F3BP1-201ENST00000440551 403 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AC068587.1-201ENST00000483613 781 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 RPL23AP72-201ENST00000492447 435 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AP001804.1-201ENST00000526868 919 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 OR11H3P-201ENST00000554547 982 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 ATP5J2P6-201ENST00000565203 266 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AL138960.1-201ENST00000613838 513 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 AC135068.5-201ENST00000624197 983 ntBASIC8.01□□□□□ -1.13
SCAPERQ9BY12 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
SCAPERQ9BY12 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCAPERQ9BY12 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8□□□□□ -1.13
SCAPERQ9BY12 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCAPERQ9BY12 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCAPERQ9BY12 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8□□□□□ -1.13
SCAPERQ9BY12 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCAPERQ9BY12 ATP5A1P4-201ENST00000556888 1605 ntBASIC8□□□□□ -1.13
SCAPERQ9BY12 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8□□□□□ -1.13
SCAPERQ9BY12 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
SCAPERQ9BY12 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC8□□□□□ -1.13
SCAPERQ9BY12 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8□□□□□ -1.13
SCAPERQ9BY12 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
SCAPERQ9BY12 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC8□□□□□ -1.13
SCAPERQ9BY12 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8□□□□□ -1.13
SCAPERQ9BY12 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC8□□□□□ -1.13
SCAPERQ9BY12 RNA5SP428-201ENST00000365129 132 ntBASIC8□□□□□ -1.13
SCAPERQ9BY12 RPS26P38-201ENST00000414476 348 ntBASIC8□□□□□ -1.13
SCAPERQ9BY12 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8□□□□□ -1.13
SCAPERQ9BY12 RIMKLBP2-201ENST00000424737 654 ntBASIC8□□□□□ -1.13
SCAPERQ9BY12 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC8□□□□□ -1.13
SCAPERQ9BY12 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC8□□□□□ -1.13
SCAPERQ9BY12 AL161722.1-201ENST00000446972 1032 ntBASIC8□□□□□ -1.13
SCAPERQ9BY12 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC8□□□□□ -1.13
SCAPERQ9BY12 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
SCAPERQ9BY12 AC122688.1-201ENST00000541494 223 ntBASIC8□□□□□ -1.13
SCAPERQ9BY12 BGLT3-201ENST00000564523 994 ntBASIC8□□□□□ -1.13
SCAPERQ9BY12 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC8□□□□□ -1.13
SCAPERQ9BY12 UGP2-232ENST00000640075 567 ntTSL 5 BASIC8□□□□□ -1.13
SCAPERQ9BY12 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms