Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CDC42P4-201ENST00000510507 563 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC107393.1-201ENST00000512403 346 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 RPA2P1-201ENST00000556557 721 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MIR3200-201ENST00000580767 85 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC040174.2-201ENST00000602701 465 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC007349.4-201ENST00000608114 532 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC007497.1-201ENST00000610421 561 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC010678.1-201ENST00000614118 713 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AL049541.2-201ENST00000626377 555 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 NMT1-201ENST00000258960 4879 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 PLA2G4E-201ENST00000399518 5266 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 RN7SKP113-201ENST00000363891 295 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MTCO2P33-201ENST00000402100 465 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 GPS2P1-201ENST00000411761 986 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC098934.3-201ENST00000430450 190 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MTND3P23-201ENST00000431980 347 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 SDC4P-201ENST00000453285 601 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MTND3P6-201ENST00000485242 339 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC010468.3-201ENST00000508225 458 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC006445.2-201ENST00000510061 472 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 XKRY-201ENST00000510392 1100 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 OR5BC1P-201ENST00000529327 739 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MT1B-202ENST00000562399 351 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 MTND4LP24-201ENST00000572277 291 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC006130.2-201ENST00000586202 326 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC073544.2-201ENST00000601155 540 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 XIST-210ENST00000602863 775 ntTSL 3 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC067959.1-201ENST00000604334 379 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 CDC37L1-AS1-201ENST00000607997 463 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC112503.1-201ENST00000608436 391 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC087385.3-201ENST00000620477 187 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AL356121.2-201ENST00000624715 780 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 SATB1-AS1-242ENST00000627496 807 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 COL14A1-203ENST00000309791 6163 ntTSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 LRP2BP-201ENST00000328559 5157 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 GOLGA8CP-201ENST00000446144 5237 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 AP004289.2-201ENST00000444413 1457 ntBASIC1.95□□□□□ -2.1
HMCN1Q96RW7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HMCN1Q96RW7 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms