Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AL122023.1-201ENST00000622847 530 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AL132796.3-201ENST00000624703 900 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 PDZK1P1-202ENST00000425209 1350 ntBASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC85AQ96PX6 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC000367.1-201ENST00000452711 1766 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AL034417.4-202ENST00000642135 2236 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 CAP1P2-201ENST00000417455 1409 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 IL6STP1-201ENST00000346911 1020 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RNU4-21P-201ENST00000362802 126 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC003045.1-201ENST00000398779 713 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RN7SKP86-201ENST00000410454 332 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RPL7P8-201ENST00000411964 730 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RPS7P12-201ENST00000422385 582 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 UBBP5-201ENST00000446970 266 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RPL21P134-201ENST00000453468 483 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC116337.2-201ENST00000477662 156 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RPL7P18-201ENST00000478965 734 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC109486.1-201ENST00000486833 374 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 RN7SL170P-201ENST00000487098 295 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 GTF2F2P1-201ENST00000511083 675 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 DPPA3P2-201ENST00000553589 478 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC011260.1-201ENST00000578420 472 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 MIR6721-201ENST00000617181 87 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AP003789.1-201ENST00000617737 605 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 SNX18P10-201ENST00000625014 519 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC111152.1-202ENST00000635848 339 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AC005539.1-201ENST00000443768 1479 ntBASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC85AQ96PX6 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 AC123769.2-201ENST00000624332 5984 ntBASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 AC009166.2-201ENST00000624410 2833 ntBASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 RNA5SP512-201ENST00000364550 120 ntBASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 HMGN1P14-201ENST00000412459 517 ntBASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 MRPS21P5-201ENST00000417885 231 ntBASIC8.29□□□□□ -1.08
CCDC85AQ96PX6 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms