Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 HMGB1P44-201ENST00000508597 572 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 MTATP6P1-201ENST00000514057 681 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 OR8G3P-201ENST00000533406 921 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 AL122125.1-201ENST00000616999 600 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
CCDC65Q8IXS2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 MTND5P12-201ENST00000502851 1449 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 RNA5SP319-201ENST00000362768 119 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 SNORA16A-201ENST00000384342 137 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 RNA5SP178-201ENST00000410380 128 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 GPS2P1-201ENST00000411761 986 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AL390119.1-201ENST00000440329 312 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AP000281.1-201ENST00000444036 316 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC105399.1-202ENST00000447303 205 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 RN7SL51P-201ENST00000468230 285 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC092754.1-201ENST00000472975 479 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AP000797.2-201ENST00000475768 606 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 OR11I1P-201ENST00000486033 954 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 OR4A43P-201ENST00000532938 908 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC027544.3-201ENST00000535082 757 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC108738.1-201ENST00000603703 237 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC103703.1-201ENST00000634783 663 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AL031595.2-201ENST00000624215 19071 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC099654.3-201ENST00000447087 1546 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 CASC19-248ENST00000641674 1356 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 Z83820.1-201ENST00000456978 1499 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 AC003973.3-201ENST00000624863 2822 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.02□□□□□ -1.45
CCDC65Q8IXS2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 SAMMSON-213ENST00000641336 1521 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 OR56A4-201ENST00000330728 1209 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 RN7SKP124-201ENST00000364730 341 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 DBIP1-201ENST00000401435 260 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC002524.1-201ENST00000411687 547 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 SRSF1P1-201ENST00000424058 520 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC104843.2-201ENST00000427666 297 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 GSTM5P1-201ENST00000434751 660 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 RN7SL273P-201ENST00000481561 299 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC090638.1-201ENST00000498296 909 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 LDHBP3-201ENST00000514909 822 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 HMGN1P9-201ENST00000515212 298 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 RN7SL356P-201ENST00000582228 248 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC060766.1-201ENST00000590824 627 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC104695.2-201ENST00000605056 775 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AL356608.1-201ENST00000610034 820 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC244107.2-201ENST00000611773 76 ntBASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC65Q8IXS2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms