Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC006960.1-201ENST00000419980 153 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 ATP5HP2-201ENST00000433885 485 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 B3GNT2P1-201ENST00000434960 952 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 MTND1P30-201ENST00000441241 901 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 RPS10P18-201ENST00000442662 495 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 CASP3P1-201ENST00000446037 609 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC233982.1-201ENST00000451247 436 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC144530.1-201ENST00000452862 555 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 TPT1P7-201ENST00000458300 517 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC107015.1-201ENST00000466902 747 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 RN7SL379P-201ENST00000479912 293 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 MTND2P33-201ENST00000506452 1031 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 RNU6-507P-201ENST00000516045 100 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC025881.1-201ENST00000518851 512 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AP003392.2-201ENST00000527269 208 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 MED28P5-201ENST00000528254 438 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 DUXAP1-201ENST00000556632 463 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 NDUFA5P11-201ENST00000567995 343 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL499605.1-201ENST00000604628 403 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 NDUFB9P1-201ENST00000604683 510 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL356321.1-201ENST00000621360 228 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF43Q68DV7 TET1P1-201ENST00000426627 2301 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 AP002800.1-201ENST00000624982 2225 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
RNF43Q68DV7 AL512329.1-201ENST00000404600 1592 ntBASIC7.12□□□□□ -1.27
RNF43Q68DV7 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC022034.1-201ENST00000512867 2156 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC087359.1-201ENST00000508335 1740 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNFT1P3-201ENST00000340898 1052 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNA5SP382-201ENST00000363355 112 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNU1-65P-201ENST00000363919 148 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 PPIAP26-201ENST00000377951 522 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 MCTS2P-201ENST00000394552 546 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 TAF9BP2-201ENST00000400856 499 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AL079341.1-201ENST00000404701 1207 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNU2-66P-201ENST00000410650 161 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RN7SKP166-201ENST00000410812 305 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNU6-920P-201ENST00000410926 92 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNA5SP155-201ENST00000411154 129 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF43Q68DV7 GTF2IP2-201ENST00000424290 697 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 NPM1P24-201ENST00000428039 894 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 OR6R1P-201ENST00000431838 940 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 ARL5AP3-201ENST00000439327 386 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 MTCYBP34-201ENST00000439552 670 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC083806.1-201ENST00000468934 316 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC015524.1-201ENST00000491585 472 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 MTND6P8-201ENST00000503471 522 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC021146.7-201ENST00000509604 775 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNA5SP116-201ENST00000516132 98 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 RNA5SP318-201ENST00000516352 92 ntBASIC7.11□□□□□ -1.27
RNF43Q68DV7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms