Protein–RNA interactions for Protein: Q3SY56

SP6, Transcription factor Sp6, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP6Q3SY56 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.36□□□□□ -1.71
SP6Q3SY56 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.36□□□□□ -1.71
SP6Q3SY56 CEACAMP11-201ENST00000455211 583 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 CBX1P5-201ENST00000475330 559 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 AC058823.1-201ENST00000485315 474 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.36□□□□□ -1.71
SP6Q3SY56 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.36□□□□□ -1.71
SP6Q3SY56 RNU6-615P-201ENST00000516065 106 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 SNORA70.20-201ENST00000516848 126 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 SCARNA16.4-201ENST00000516956 187 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 AC027369.2-201ENST00000528030 440 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
SP6Q3SY56 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.36□□□□□ -1.71
SP6Q3SY56 AC068305.2-201ENST00000550567 1205 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 AL845552.1-201ENST00000556820 323 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 MIR3154-201ENST00000577829 84 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.36□□□□□ -1.71
SP6Q3SY56 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.36□□□□□ -1.71
SP6Q3SY56 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.36□□□□□ -1.71
SP6Q3SY56 AC139792.1-201ENST00000607051 647 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.36□□□□□ -1.71
SP6Q3SY56 AC073869.10-201ENST00000642016 354 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 AC008691.1-209ENST00000642094 814 ntBASIC4.36□□□□□ -1.71
SP6Q3SY56 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.36□□□□□ -1.71
SP6Q3SY56 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.36□□□□□ -1.71
SP6Q3SY56 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.36□□□□□ -1.71
SP6Q3SY56 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SP6Q3SY56 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SP6Q3SY56 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SP6Q3SY56 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SP6Q3SY56 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.36□□□□□ -1.71
SP6Q3SY56 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SP6Q3SY56 TET1P1-201ENST00000426627 2301 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AL022393.1-201ENST00000625142 1677 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC008079.2-201ENST00000623543 20396 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SP6Q3SY56 RNA5SP394-201ENST00000364216 119 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AC245060.4-201ENST00000413293 1121 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.35□□□□□ -1.71
SP6Q3SY56 OR5M12P-201ENST00000423388 929 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AC113412.1-201ENST00000425840 504 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.35□□□□□ -1.71
SP6Q3SY56 NANOGP4-201ENST00000427230 913 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.35□□□□□ -1.71
SP6Q3SY56 BX119321.1-201ENST00000428912 797 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.35□□□□□ -1.71
SP6Q3SY56 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.35□□□□□ -1.71
SP6Q3SY56 GTF3AP5-201ENST00000442645 697 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AC005297.1-201ENST00000444765 862 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AL035090.1-201ENST00000454835 332 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.35□□□□□ -1.71
SP6Q3SY56 LSM3P4-201ENST00000502948 309 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.35□□□□□ -1.71
SP6Q3SY56 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.35□□□□□ -1.71
SP6Q3SY56 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC127381.1-201ENST00000555979 939 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC092121.1-201ENST00000569452 202 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 LINC00556-201ENST00000569603 412 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.35□□□□□ -1.71
SP6Q3SY56 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 AC006363.1-201ENST00000603806 463 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AL162431.4-201ENST00000604674 411 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 AP000648.2-201ENST00000624182 404 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SP6Q3SY56 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SP6Q3SY56 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.35□□□□□ -1.71
SP6Q3SY56 MRRFP1-201ENST00000435941 1675 ntBASIC4.35□□□□□ -1.71
SP6Q3SY56 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SP6Q3SY56 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.34□□□□□ -1.71
SP6Q3SY56 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SP6Q3SY56 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SP6Q3SY56 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.34□□□□□ -1.71
SP6Q3SY56 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SP6Q3SY56 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.34□□□□□ -1.71
SP6Q3SY56 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.34□□□□□ -1.71
SP6Q3SY56 AL133173.1-201ENST00000423458 397 ntBASIC4.34□□□□□ -1.71
SP6Q3SY56 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.34□□□□□ -1.71
SP6Q3SY56 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.34□□□□□ -1.71
SP6Q3SY56 GSTM5P1-201ENST00000434751 660 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms