Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.97□□□□□ -1.45
TPM4P67936 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM4P67936 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.97□□□□□ -1.45
TPM4P67936 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.97□□□□□ -1.45
TPM4P67936 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TPM4P67936 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.96□□□□□ -1.45
TPM4P67936 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TPM4P67936 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.96□□□□□ -1.45
TPM4P67936 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TPM4P67936 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 AC133552.1-201ENST00000569988 4007 ntBASIC5.96□□□□□ -1.46
TPM4P67936 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.96□□□□□ -1.46
TPM4P67936 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
TPM4P67936 RNA5SP273-201ENST00000362484 113 ntBASIC5.96□□□□□ -1.46
TPM4P67936 GAPDHP42-201ENST00000406848 981 ntBASIC5.96□□□□□ -1.46
TPM4P67936 AC104333.2-201ENST00000422630 192 ntBASIC5.96□□□□□ -1.46
TPM4P67936 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM4P67936 AC046176.1-201ENST00000435260 1170 ntBASIC5.96□□□□□ -1.46
TPM4P67936 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.96□□□□□ -1.46
TPM4P67936 AL450996.1-201ENST00000445574 1202 ntBASIC5.96□□□□□ -1.46
TPM4P67936 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.96□□□□□ -1.46
TPM4P67936 AC093166.3-201ENST00000448785 303 ntBASIC5.96□□□□□ -1.46
TPM4P67936 AP000547.1-201ENST00000454360 617 ntBASIC5.96□□□□□ -1.46
TPM4P67936 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.96□□□□□ -1.46
TPM4P67936 RPL15P21-201ENST00000495592 567 ntBASIC5.96□□□□□ -1.46
TPM4P67936 SUMO2P4-201ENST00000504193 276 ntBASIC5.96□□□□□ -1.46
TPM4P67936 OR5H7P-201ENST00000514084 930 ntBASIC5.96□□□□□ -1.46
TPM4P67936 HSD3BP3-201ENST00000514706 994 ntBASIC5.96□□□□□ -1.46
TPM4P67936 AP006245.2-201ENST00000522004 300 ntBASIC5.96□□□□□ -1.46
TPM4P67936 AL845552.1-201ENST00000556820 323 ntBASIC5.96□□□□□ -1.46
TPM4P67936 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.96□□□□□ -1.46
TPM4P67936 PPATP2-201ENST00000605635 508 ntBASIC5.96□□□□□ -1.46
TPM4P67936 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 AP001962.1-201ENST00000624114 559 ntBASIC5.96□□□□□ -1.46
TPM4P67936 PROS2P-201ENST00000474651 1951 ntBASIC5.96□□□□□ -1.46
TPM4P67936 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.96□□□□□ -1.46
TPM4P67936 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TPM4P67936 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TPM4P67936 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TPM4P67936 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.95□□□□□ -1.46
TPM4P67936 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
TPM4P67936 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TPM4P67936 RNU1-150P-201ENST00000362491 162 ntBASIC5.95□□□□□ -1.46
TPM4P67936 RNA5SP232-201ENST00000364144 119 ntBASIC5.95□□□□□ -1.46
TPM4P67936 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.95□□□□□ -1.46
TPM4P67936 OR6C64P-201ENST00000419708 825 ntBASIC5.95□□□□□ -1.46
TPM4P67936 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 BX323845.3-201ENST00000428215 527 ntBASIC5.95□□□□□ -1.46
TPM4P67936 OR6D1P-201ENST00000436165 939 ntBASIC5.95□□□□□ -1.46
TPM4P67936 AL672138.1-201ENST00000450604 1015 ntBASIC5.95□□□□□ -1.46
TPM4P67936 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 VDAC2P4-201ENST00000452925 711 ntBASIC5.95□□□□□ -1.46
TPM4P67936 DNAJB5P1-201ENST00000454004 806 ntBASIC5.95□□□□□ -1.46
TPM4P67936 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.95□□□□□ -1.46
TPM4P67936 AC098818.1-201ENST00000478593 252 ntBASIC5.95□□□□□ -1.46
TPM4P67936 RPL5P22-201ENST00000480199 884 ntBASIC5.95□□□□□ -1.46
TPM4P67936 AC044810.1-201ENST00000480271 711 ntBASIC5.95□□□□□ -1.46
TPM4P67936 RPL7P41-201ENST00000485823 957 ntBASIC5.95□□□□□ -1.46
TPM4P67936 NIFKP7-201ENST00000503365 834 ntBASIC5.95□□□□□ -1.46
TPM4P67936 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM4P67936 RNU6-615P-201ENST00000516065 106 ntBASIC5.95□□□□□ -1.46
TPM4P67936 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.95□□□□□ -1.46
TPM4P67936 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.95□□□□□ -1.46
TPM4P67936 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.95□□□□□ -1.46
TPM4P67936 SETP1-201ENST00000556014 845 ntBASIC5.95□□□□□ -1.46
TPM4P67936 DPPA2P4-201ENST00000563717 878 ntBASIC5.95□□□□□ -1.46
TPM4P67936 AC015802.2-201ENST00000589690 189 ntBASIC5.95□□□□□ -1.46
TPM4P67936 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.95□□□□□ -1.46
TPM4P67936 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TPM4P67936 AC073869.7-201ENST00000640874 297 ntBASIC5.95□□□□□ -1.46
TPM4P67936 OR4G1P-202ENST00000641173 1788 ntBASIC5.95□□□□□ -1.46
TPM4P67936 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM4P67936 MAPK10-320ENST00000641462 6696 ntBASIC5.95□□□□□ -1.46
TPM4P67936 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.94□□□□□ -1.46
TPM4P67936 MTCO1P7-201ENST00000419523 1542 ntBASIC5.94□□□□□ -1.46
TPM4P67936 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.94□□□□□ -1.46
TPM4P67936 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM4P67936 CASC19-248ENST00000641674 1356 ntBASIC5.94□□□□□ -1.46
TPM4P67936 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TPM4P67936 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms