Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.92□□□□□ -1.46
SSR1P43307 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.92□□□□□ -1.46
SSR1P43307 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.92□□□□□ -1.46
SSR1P43307 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.92□□□□□ -1.46
SSR1P43307 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.92□□□□□ -1.46
SSR1P43307 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SSR1P43307 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSR1P43307 MIR6071-201ENST00000616741 78 ntBASIC5.92□□□□□ -1.46
SSR1P43307 AC131238.1-201ENST00000617135 328 ntBASIC5.92□□□□□ -1.46
SSR1P43307 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSR1P43307 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.92□□□□□ -1.46
SSR1P43307 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSR1P43307 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSR1P43307 DDX18P3-201ENST00000404856 2007 ntBASIC5.92□□□□□ -1.46
SSR1P43307 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SSR1P43307 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSR1P43307 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.92□□□□□ -1.46
SSR1P43307 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.91□□□□□ -1.46
SSR1P43307 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSR1P43307 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSR1P43307 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSR1P43307 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SSR1P43307 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSR1P43307 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSR1P43307 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSR1P43307 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SSR1P43307 AC092681.1-201ENST00000297369 291 ntBASIC5.91□□□□□ -1.46
SSR1P43307 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSR1P43307 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.91□□□□□ -1.46
SSR1P43307 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSR1P43307 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 RN7SKP187-201ENST00000365536 330 ntBASIC5.91□□□□□ -1.46
SSR1P43307 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSR1P43307 OR7E156P-201ENST00000400303 464 ntBASIC5.91□□□□□ -1.46
SSR1P43307 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.91□□□□□ -1.46
SSR1P43307 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 AC066692.1-201ENST00000421721 457 ntBASIC5.91□□□□□ -1.46
SSR1P43307 MTND2P40-201ENST00000436718 841 ntBASIC5.91□□□□□ -1.46
SSR1P43307 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSR1P43307 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.91□□□□□ -1.46
SSR1P43307 RPS23P9-201ENST00000448848 438 ntBASIC5.91□□□□□ -1.46
SSR1P43307 AC098583.1-201ENST00000480875 255 ntBASIC5.91□□□□□ -1.46
SSR1P43307 AC073610.1-201ENST00000489971 396 ntBASIC5.91□□□□□ -1.46
SSR1P43307 RPL37P23-201ENST00000492641 294 ntBASIC5.91□□□□□ -1.46
SSR1P43307 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.91□□□□□ -1.46
SSR1P43307 AF186190.1-201ENST00000517470 480 ntBASIC5.91□□□□□ -1.46
SSR1P43307 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.91□□□□□ -1.46
SSR1P43307 PMS2P3-207ENST00000529061 717 ntBASIC5.91□□□□□ -1.46
SSR1P43307 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.91□□□□□ -1.46
SSR1P43307 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.91□□□□□ -1.46
SSR1P43307 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.91□□□□□ -1.46
SSR1P43307 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.91□□□□□ -1.46
SSR1P43307 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.91□□□□□ -1.46
SSR1P43307 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.91□□□□□ -1.46
SSR1P43307 AC022919.1-201ENST00000624979 626 ntBASIC5.91□□□□□ -1.46
SSR1P43307 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.91□□□□□ -1.46
SSR1P43307 LINC01355-201ENST00000566551 5444 ntBASIC5.91□□□□□ -1.46
SSR1P43307 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SSR1P43307 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.91□□□□□ -1.46
SSR1P43307 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSR1P43307 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
SSR1P43307 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSR1P43307 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSR1P43307 RNU6-729P-201ENST00000384399 107 ntBASIC5.9□□□□□ -1.46
SSR1P43307 AL356968.2-201ENST00000412769 1257 ntBASIC5.9□□□□□ -1.46
SSR1P43307 AC245060.4-201ENST00000413293 1121 ntBASIC5.9□□□□□ -1.46
SSR1P43307 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.9□□□□□ -1.46
SSR1P43307 AL359265.1-201ENST00000440296 795 ntBASIC5.9□□□□□ -1.46
SSR1P43307 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.9□□□□□ -1.46
SSR1P43307 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.9□□□□□ -1.46
SSR1P43307 RN7SL197P-201ENST00000466981 299 ntBASIC5.9□□□□□ -1.46
SSR1P43307 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 DUTP7-201ENST00000507982 486 ntBASIC5.9□□□□□ -1.46
SSR1P43307 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.9□□□□□ -1.46
SSR1P43307 RNA5SP473-201ENST00000516402 125 ntBASIC5.9□□□□□ -1.46
SSR1P43307 SNORA70.20-201ENST00000516848 126 ntBASIC5.9□□□□□ -1.46
SSR1P43307 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.9□□□□□ -1.46
SSR1P43307 AC024940.3-201ENST00000538551 316 ntBASIC5.9□□□□□ -1.46
SSR1P43307 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 AC015802.2-201ENST00000589690 189 ntBASIC5.9□□□□□ -1.46
SSR1P43307 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.9□□□□□ -1.46
SSR1P43307 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSR1P43307 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSR1P43307 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.9□□□□□ -1.46
SSR1P43307 AL138895.2-201ENST00000603019 178 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms