Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 AC016550.3-201ENST00000515706 767 ntBASIC5.82□□□□□ -1.48
HADHAP40939 SNORA70.11-201ENST00000515987 138 ntBASIC5.82□□□□□ -1.48
HADHAP40939 SNORA70.13-201ENST00000516116 138 ntBASIC5.82□□□□□ -1.48
HADHAP40939 Y_RNA.667-201ENST00000516212 107 ntBASIC5.82□□□□□ -1.48
HADHAP40939 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.82□□□□□ -1.48
HADHAP40939 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.82□□□□□ -1.48
HADHAP40939 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.82□□□□□ -1.48
HADHAP40939 FAM27E4-201ENST00000605259 342 ntBASIC5.82□□□□□ -1.48
HADHAP40939 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.82□□□□□ -1.48
HADHAP40939 FO681491.1-202ENST00000623392 737 ntBASIC5.82□□□□□ -1.48
HADHAP40939 AC019080.5-201ENST00000624891 757 ntBASIC5.82□□□□□ -1.48
HADHAP40939 HPVC1-201ENST00000629899 1198 ntBASIC5.82□□□□□ -1.48
HADHAP40939 OR11H2-202ENST00000641517 1085 ntBASIC5.82□□□□□ -1.48
HADHAP40939 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HADHAP40939 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 MFSD8-239ENST00000641590 2479 ntBASIC5.82□□□□□ -1.48
HADHAP40939 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
HADHAP40939 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HADHAP40939 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.82□□□□□ -1.48
HADHAP40939 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HADHAP40939 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.81□□□□□ -1.48
HADHAP40939 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 RNA5SP273-201ENST00000362484 113 ntBASIC5.81□□□□□ -1.48
HADHAP40939 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HADHAP40939 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.81□□□□□ -1.48
HADHAP40939 AK4P4-201ENST00000419465 646 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AL035660.1-201ENST00000422041 222 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.81□□□□□ -1.48
HADHAP40939 OR10T1P-201ENST00000424327 947 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC113412.1-201ENST00000425840 504 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.81□□□□□ -1.48
HADHAP40939 RPS29P14-201ENST00000431518 171 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC007563.3-201ENST00000433233 371 ntBASIC5.81□□□□□ -1.48
HADHAP40939 ZFAND6P1-201ENST00000434138 605 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC099670.2-201ENST00000435130 321 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.81□□□□□ -1.48
HADHAP40939 RPS15AP29-201ENST00000445539 400 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AP002345.1-201ENST00000456493 928 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.81□□□□□ -1.48
HADHAP40939 SNORD125-201ENST00000459538 96 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC089999.1-201ENST00000460336 374 ntBASIC5.81□□□□□ -1.48
HADHAP40939 RN7SL197P-201ENST00000466981 299 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC015864.1-201ENST00000496512 544 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC105384.2-201ENST00000508433 640 ntBASIC5.81□□□□□ -1.48
HADHAP40939 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.81□□□□□ -1.48
HADHAP40939 FABP5P6-201ENST00000510588 409 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC074255.1-201ENST00000511259 501 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.81□□□□□ -1.48
HADHAP40939 GAPDHP62-201ENST00000515313 990 ntBASIC5.81□□□□□ -1.48
HADHAP40939 RNA5SP438-201ENST00000516561 112 ntBASIC5.81□□□□□ -1.48
HADHAP40939 RNA5SP271-201ENST00000516700 88 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.81□□□□□ -1.48
HADHAP40939 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.81□□□□□ -1.48
HADHAP40939 HMGN2P36-201ENST00000529541 409 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.81□□□□□ -1.48
HADHAP40939 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.81□□□□□ -1.48
HADHAP40939 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.81□□□□□ -1.48
HADHAP40939 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
HADHAP40939 FAM106CP-201ENST00000582212 507 ntBASIC5.81□□□□□ -1.48
HADHAP40939 BMS1P7-201ENST00000602440 1052 ntBASIC5.81□□□□□ -1.48
HADHAP40939 AL133247.2-201ENST00000603236 482 ntBASIC5.81□□□□□ -1.48
HADHAP40939 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.81□□□□□ -1.48
HADHAP40939 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.81□□□□□ -1.48
HADHAP40939 AC005005.4-201ENST00000623789 16698 ntBASIC5.81□□□□□ -1.48
HADHAP40939 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HADHAP40939 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.81□□□□□ -1.48
HADHAP40939 SPATA2P1-201ENST00000431223 2055 ntBASIC5.81□□□□□ -1.48
HADHAP40939 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HADHAP40939 CASC19-260ENST00000641828 2001 ntBASIC5.81□□□□□ -1.48
HADHAP40939 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 AL353796.1-201ENST00000561542 3241 ntBASIC5.8□□□□□ -1.48
HADHAP40939 MAPK10-338ENST00000641647 3362 ntBASIC5.8□□□□□ -1.48
HADHAP40939 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 AP000473.2-201ENST00000602659 1537 ntBASIC5.8□□□□□ -1.48
HADHAP40939 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.8□□□□□ -1.48
HADHAP40939 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.8□□□□□ -1.48
HADHAP40939 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HADHAP40939 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms