Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 AC104634.1-201ENST00000452720 462 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 AC063943.1-201ENST00000465434 453 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.34□□□□□ -1.4
SCN4AP35499 AC079080.1-201ENST00000479841 822 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 ATP5LP5-201ENST00000483050 299 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.34□□□□□ -1.4
SCN4AP35499 AP001804.1-201ENST00000526868 919 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 AC137627.1-201ENST00000545761 289 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 AL360012.1-201ENST00000602813 131 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 MEMO1P5-201ENST00000604810 406 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 AC006338.2-201ENST00000616864 791 ntBASIC6.34□□□□□ -1.4
SCN4AP35499 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
SCN4AP35499 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
SCN4AP35499 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 AL137918.1-201ENST00000624542 1922 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SCN4AP35499 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.33□□□□□ -1.4
SCN4AP35499 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 AC007159.1-201ENST00000566529 4706 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 SNORD56.6-201ENST00000384569 71 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SCN4AP35499 CHEK2P3-201ENST00000416118 248 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 RPL7P11-201ENST00000437586 658 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 AC058823.1-201ENST00000485315 474 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 AC093824.1-201ENST00000508796 343 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN4AP35499 AP002981.1-201ENST00000517692 975 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 AC078899.1-201ENST00000521432 1185 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.33□□□□□ -1.4
SCN4AP35499 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 AL359757.1-201ENST00000623176 255 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 HSPD1P7-201ENST00000447985 1686 ntBASIC6.33□□□□□ -1.4
SCN4AP35499 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SCN4AP35499 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.33□□□□□ -1.4
SCN4AP35499 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCN4AP35499 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.33□□□□□ -1.4
SCN4AP35499 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.32□□□□□ -1.4
SCN4AP35499 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN4AP35499 MIR23A-201ENST00000385245 73 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 MRPS21P2-201ENST00000424704 264 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 BX679664.2-201ENST00000439282 283 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN4AP35499 IGKV2D-10-201ENST00000520194 281 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN4AP35499 OR7E128P-201ENST00000532736 1024 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 GCSHP4-201ENST00000538792 439 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN4AP35499 AP000769.2-201ENST00000602344 396 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 AC103792.1-201ENST00000603591 919 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 AC011453.2-201ENST00000603737 729 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 AC005252.1-201ENST00000604518 1063 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 AL034374.2-201ENST00000605281 548 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN4AP35499 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN4AP35499 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 AL359195.2-201ENST00000623657 4412 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN4AP35499 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCN4AP35499 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.32□□□□□ -1.4
SCN4AP35499 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SCN4AP35499 U3.3-201ENST00000362986 216 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 RPL17P36-201ENST00000420302 549 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 RPS27AP7-201ENST00000422792 455 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 RPS4XP16-201ENST00000427198 791 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.32□□□□□ -1.4
SCN4AP35499 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.32□□□□□ -1.4
SCN4AP35499 AL110118.1-201ENST00000553543 400 ntBASIC6.32□□□□□ -1.4
SCN4AP35499 BGLT3-201ENST00000564523 994 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms